Transcript: ENST00000657800.1 HRAT17-214

Description

heart tissue-associated transcript 17 [Source:NCBI gene (formerly Entrezgene);Acc:101928036]

Location

Chromosome 7: 112,953,795-112,977,387 reverse strand.

About this transcript

This transcript has 3 exons and maps to 213 oligo probes.

Gene

This transcript is a product of gene ENSG00000234520.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000806091.1	HRAT17-250	967	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000664332.3	HRAT17-225	1974	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669304.2	HRAT17-239	1909	No protein	-	lncRNA	-	-
ENST00000666383.1	HRAT17-228	1878	No protein	-	lncRNA	-	-
ENST00000655518.1	HRAT17-208	1826	No protein	-	lncRNA	-	-
ENST00000653138.2	HRAT17-203	1806	No protein	-	lncRNA	-	-
ENST00000654823.2	HRAT17-205	1789	No protein	-	lncRNA	-	-
ENST00000671010.2	HRAT17-241	1566	No protein	-	lncRNA	-	-
ENST00000663321.2	HRAT17-220	1566	No protein	-	lncRNA	-	-
ENST00000655508.2	HRAT17-207	1519	No protein	-	lncRNA	-	-
ENST00000657800.1	HRAT17-214	1471	No protein	-	lncRNA	-	-
ENST00000662144.2	HRAT17-218	1468	No protein	-	lncRNA	-	-
ENST00000806094.1	HRAT17-253	1388	No protein	-	lncRNA	-	-
ENST00000667715.3	HRAT17-231	1078	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657218.1	HRAT17-211	1064	No protein	-	lncRNA	-	-
ENST00000668658.1	HRAT17-238	1048	No protein	-	lncRNA	-	-
ENST00000666073.2	HRAT17-227	1042	No protein	-	lncRNA	-	-
ENST00000666984.3	HRAT17-229	1010	No protein	-	lncRNA	-	-
ENST00000668166.3	HRAT17-233	983	No protein	-	lncRNA	-	-
ENST00000806092.1	HRAT17-251	930	No protein	-	lncRNA	-	-
ENST00000657442.2	HRAT17-213	926	No protein	-	lncRNA	-	-
ENST00000667780.3	HRAT17-232	889	No protein	-	lncRNA	-	-
ENST00000662721.1	HRAT17-219	889	No protein	-	lncRNA	-	-
ENST00000655822.2	HRAT17-210	880	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671176.1	HRAT17-242	844	No protein	-	lncRNA	-	-
ENST00000663899.1	HRAT17-223	825	No protein	-	lncRNA	-	-
ENST00000806102.1	HRAT17-261	804	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664053.1	HRAT17-224	781	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658790.2	HRAT17-215	742	No protein	-	lncRNA	-	-
ENST00000655743.2	HRAT17-209	722	No protein	-	lncRNA	-	-
ENST00000691508.2	HRAT17-245	712	No protein	-	lncRNA	-	-
ENST00000451962.6	HRAT17-202	699	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000665351.1	HRAT17-226	693	No protein	-	lncRNA	-	-
ENST00000657319.1	HRAT17-212	691	No protein	-	lncRNA	-	-
ENST00000667102.2	HRAT17-230	682	No protein	-	lncRNA	-	-
ENST00000806097.1	HRAT17-256	649	No protein	-	lncRNA	-	-
ENST00000668532.2	HRAT17-237	648	No protein	-	lncRNA	-	-
ENST00000806101.1	HRAT17-260	639	No protein	-	lncRNA	-	-
ENST00000663489.2	HRAT17-221	635	No protein	-	lncRNA	-	-
ENST00000668296.1	HRAT17-234	623	No protein	-	lncRNA	-	-
ENST00000692090.2	HRAT17-247	587	No protein	-	lncRNA	-	-
ENST00000668427.3	HRAT17-236	584	No protein	-	lncRNA	-	-
ENST00000806099.1	HRAT17-258	577	No protein	-	lncRNA	-	-
ENST00000806103.1	HRAT17-262	564	No protein	-	lncRNA	-	-
ENST00000806111.1	HRAT17-270	562	No protein	-	lncRNA	-	-
ENST00000702960.2	HRAT17-249	559	No protein	-	lncRNA	-	-
ENST00000691774.2	HRAT17-246	550	No protein	-	lncRNA	-	-
ENST00000447785.1	HRAT17-201	547	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000806107.1	HRAT17-266	539	No protein	-	lncRNA	-	-
ENST00000806095.1	HRAT17-254	527	No protein	-	lncRNA	-	-
ENST00000806100.1	HRAT17-259	522	No protein	-	lncRNA	-	-
ENST00000659589.2	HRAT17-216	519	No protein	-	lncRNA	-	-
ENST00000670812.1	HRAT17-240	513	No protein	-	lncRNA	-	-
ENST00000806105.1	HRAT17-264	503	No protein	-	lncRNA	-	-
ENST00000702926.2	HRAT17-248	493	No protein	-	lncRNA	-	-
ENST00000687546.3	HRAT17-243	491	No protein	-	lncRNA	-	-
ENST00000687784.2	HRAT17-244	485	No protein	-	lncRNA	-	-
ENST00000663513.3	HRAT17-222	482	No protein	-	lncRNA	-	-
ENST00000806109.1	HRAT17-268	481	No protein	-	lncRNA	-	-
ENST00000806093.1	HRAT17-252	474	No protein	-	lncRNA	-	-
ENST00000806098.1	HRAT17-257	463	No protein	-	lncRNA	-	-
ENST00000806110.1	HRAT17-269	446	No protein	-	lncRNA	-	-
ENST00000668328.2	HRAT17-235	414	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661750.1	HRAT17-217	402	No protein	-	lncRNA	-	-
ENST00000653618.2	HRAT17-204	385	No protein	-	lncRNA	-	-
ENST00000806106.1	HRAT17-265	371	No protein	-	lncRNA	-	-
ENST00000654962.2	HRAT17-206	368	No protein	-	lncRNA	-	-
ENST00000806104.1	HRAT17-263	367	No protein	-	lncRNA	-	-
ENST00000806096.1	HRAT17-255	327	No protein	-	lncRNA	-	-
ENST00000806108.1	HRAT17-267	296	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,471 bps,

Version

ENST00000657800.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000657800.1 HRAT17-214

Summary

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Transcript: ENST00000657800.1 HRAT17-214

Summary

About Us

Get help

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