Transcript: ENST00000657481.3 LINC02428-206

Description

long intergenic non-protein coding RNA 2428 [Source:HGNC Symbol;Acc:HGNC:53359]

Location

Chromosome 4: 103,425,006-103,454,280 forward strand.

About this transcript

This transcript has 3 exons and maps to 97 oligo probes.

Gene

This transcript is a product of gene ENSG00000248740.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000656681.1	LINC02428-205	1257	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666142.2	LINC02428-208	1621	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000687316.2	LINC02428-211	1555	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000510200.4	LINC02428-202	1486	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000669559.2	LINC02428-210	1382	No protein	-	lncRNA	-	-
ENST00000664815.2	LINC02428-207	1067	No protein	-	lncRNA	-	-
ENST00000657481.3	LINC02428-206	973	No protein	-	lncRNA	-	-
ENST00000802497.1	LINC02428-215	921	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656104.2	LINC02428-204	919	No protein	-	lncRNA	-	-
ENST00000668077.1	LINC02428-209	774	No protein	-	lncRNA	-	-
ENST00000802498.1	LINC02428-216	694	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000802496.1	LINC02428-214	573	No protein	-	lncRNA	-	-
ENST00000802506.1	LINC02428-224	559	No protein	-	lncRNA	-	-
ENST00000701460.2	LINC02428-212	540	No protein	-	lncRNA	-	-
ENST00000508099.5	LINC02428-201	527	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000802505.1	LINC02428-223	526	No protein	-	lncRNA	-	-
ENST00000802495.1	LINC02428-213	506	No protein	-	lncRNA	-	-
ENST00000802501.1	LINC02428-219	499	No protein	-	lncRNA	-	-
ENST00000513793.5	LINC02428-203	438	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000802503.1	LINC02428-221	422	No protein	-	lncRNA	-	-
ENST00000802504.1	LINC02428-222	405	No protein	-	lncRNA	-	-
ENST00000802499.1	LINC02428-217	364	No protein	-	lncRNA	-	-
ENST00000802500.1	LINC02428-218	331	No protein	-	lncRNA	-	-
ENST00000802502.1	LINC02428-220	319	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 973 bps,

Version

ENST00000657481.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000657481.3 LINC02428-206

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Transcript: ENST00000657481.3 LINC02428-206

Summary

About Us

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