Transcript: ENST00000657301.1 LINC00158-208

Description

long intergenic non-protein coding RNA 158 [Source:HGNC Symbol;Acc:HGNC:1283]

Gene Synonyms

C21ORF42, NCRNA00158

Location

Chromosome 21: 25,385,892-25,418,264 reverse strand.

About this transcript

This transcript has 3 exons and maps to 307 oligo probes.

Gene

This transcript is a product of gene ENSG00000185433.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000332587.8	LINC00158-201	1476	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000653079.1	LINC00158-206	1490	No protein	-	lncRNA	-	-
ENST00000670098.1	LINC00158-223	1421	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000439840.2	LINC00158-202	1399	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000441013.5	LINC00158-204	1380	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000664370.1	LINC00158-216	1320	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659748.1	LINC00158-211	1295	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000686572.1	LINC00158-225	1244	No protein	-	lncRNA	-	-
ENST00000669436.1	LINC00158-222	1218	No protein	-	lncRNA	-	-
ENST00000652840.1	LINC00158-205	1203	No protein	-	lncRNA	-	-
ENST00000662734.1	LINC00158-214	1165	No protein	-	lncRNA	-	-
ENST00000668015.1	LINC00158-220	1098	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662287.1	LINC00158-212	1070	No protein	-	lncRNA	-	-
ENST00000662827.1	LINC00158-215	1057	No protein	-	lncRNA	-	-
ENST00000655536.1	LINC00158-207	1054	No protein	-	lncRNA	-	-
ENST00000665829.1	LINC00158-218	1051	No protein	-	lncRNA	-	-
ENST00000659593.1	LINC00158-210	1047	No protein	-	lncRNA	-	-
ENST00000659435.1	LINC00158-209	998	No protein	-	lncRNA	-	-
ENST00000662610.1	LINC00158-213	898	No protein	-	lncRNA	-	-
ENST00000665160.1	LINC00158-217	870	No protein	-	lncRNA	-	-
ENST00000657301.1	LINC00158-208	841	No protein	-	lncRNA	-	-
ENST00000667265.1	LINC00158-219	832	No protein	-	lncRNA	-	-
ENST00000668944.1	LINC00158-221	826	No protein	-	lncRNA	-	-
ENST00000440205.5	LINC00158-203	740	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000671034.1	LINC00158-224	685	No protein	-	lncRNA	-	-
ENST00000843939.1	LINC00158-227	416	No protein	-	lncRNA	-	-
ENST00000843938.1	LINC00158-226	366	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 841 bps,

Version

ENST00000657301.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000657301.1 LINC00158-208

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Transcript: ENST00000657301.1 LINC00158-208

Summary

About Us

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