Transcript: ENST00000657208.1 LINC01681-205

Description

long intergenic non-protein coding RNA 1681 [Source:HGNC Symbol;Acc:HGNC:52468]

Location

Chromosome 1: 170,174,615-170,241,564 forward strand.

About this transcript

This transcript has 6 exons and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSG00000233985.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000666308.1	LINC01681-209	887	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671647.1	LINC01681-213	1363	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654909.1	LINC01681-203	1129	No protein	-	lncRNA	-	-
ENST00000790824.1	LINC01681-214	1104	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661719.1	LINC01681-207	1028	No protein	-	lncRNA	-	-
ENST00000669101.1	LINC01681-210	954	No protein	-	lncRNA	-	-
ENST00000654877.1	LINC01681-202	938	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000790830.1	LINC01681-220	928	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657208.1	LINC01681-205	871	No protein	-	lncRNA	-	-
ENST00000790831.1	LINC01681-221	849	No protein	-	lncRNA	-	-
ENST00000669112.1	LINC01681-211	840	No protein	-	lncRNA	-	-
ENST00000790835.1	LINC01681-225	827	No protein	-	lncRNA	-	-
ENST00000790827.1	LINC01681-217	825	No protein	-	lncRNA	-	-
ENST00000661826.1	LINC01681-208	805	No protein	-	lncRNA	-	-
ENST00000660112.1	LINC01681-206	780	No protein	-	lncRNA	-	-
ENST00000439184.1	LINC01681-201	760	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000790839.1	LINC01681-229	756	No protein	-	lncRNA	-	-
ENST00000790832.1	LINC01681-222	700	No protein	-	lncRNA	-	-
ENST00000790837.1	LINC01681-227	662	No protein	-	lncRNA	-	-
ENST00000657163.1	LINC01681-204	620	No protein	-	lncRNA	-	-
ENST00000669113.1	LINC01681-212	612	No protein	-	lncRNA	-	-
ENST00000790828.1	LINC01681-218	573	No protein	-	lncRNA	-	-
ENST00000790825.1	LINC01681-215	571	No protein	-	lncRNA	-	-
ENST00000790838.1	LINC01681-228	539	No protein	-	lncRNA	-	-
ENST00000790836.1	LINC01681-226	529	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000790834.1	LINC01681-224	521	No protein	-	lncRNA	-	-
ENST00000790840.1	LINC01681-230	465	No protein	-	lncRNA	-	-
ENST00000790833.1	LINC01681-223	379	No protein	-	lncRNA	-	-
ENST00000790826.1	LINC01681-216	378	No protein	-	lncRNA	-	-
ENST00000790829.1	LINC01681-219	258	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 871 bps,

Version

ENST00000657208.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000657208.1 LINC01681-205

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Transcript: ENST00000657208.1 LINC01681-205

Summary

About Us

Get help

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