Transcript: ENST00000657128.1 LINC02395-217

Description

long intergenic non-protein coding RNA 2395 [Source:HGNC Symbol;Acc:HGNC:53322]

Location

Chromosome 12: 49,911,914-49,930,324 forward strand.

About this transcript

This transcript has 7 exons and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000257771.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000657051.1	LINC02395-216	1451	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000662741.1	LINC02395-228	3394	No protein	-	lncRNA	-	-
ENST00000546821.5	LINC02395-201	3157	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000669495.1	LINC02395-253	1976	No protein	-	lncRNA	-	-
ENST00000655750.1	LINC02395-210	1955	No protein	-	lncRNA	-	-
ENST00000664245.1	LINC02395-235	1931	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670201.1	LINC02395-256	1897	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669550.1	LINC02395-254	1873	No protein	-	lncRNA	-	-
ENST00000669347.1	LINC02395-252	1859	No protein	-	lncRNA	-	-
ENST00000663596.1	LINC02395-231	1847	No protein	-	lncRNA	-	-
ENST00000656471.1	LINC02395-214	1840	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665234.1	LINC02395-240	1698	No protein	-	lncRNA	-	-
ENST00000656286.1	LINC02395-213	1685	No protein	-	lncRNA	-	-
ENST00000665167.1	LINC02395-239	1644	No protein	-	lncRNA	-	-
ENST00000655869.1	LINC02395-211	1615	No protein	-	lncRNA	-	-
ENST00000657679.1	LINC02395-219	1579	No protein	-	lncRNA	-	-
ENST00000667803.1	LINC02395-247	1562	No protein	-	lncRNA	-	-
ENST00000654781.1	LINC02395-209	1559	No protein	-	lncRNA	-	-
ENST00000664860.1	LINC02395-237	1540	No protein	-	lncRNA	-	-
ENST00000663839.1	LINC02395-233	1535	No protein	-	lncRNA	-	-
ENST00000653417.1	LINC02395-207	1495	No protein	-	lncRNA	-	-
ENST00000547954.2	LINC02395-203	1494	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000667671.1	LINC02395-246	1479	No protein	-	lncRNA	-	-
ENST00000828039.1	LINC02395-262	1465	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662801.1	LINC02395-229	1450	No protein	-	lncRNA	-	-
ENST00000664985.1	LINC02395-238	1448	No protein	-	lncRNA	-	-
ENST00000655893.1	LINC02395-212	1443	No protein	-	lncRNA	-	-
ENST00000659762.1	LINC02395-224	1439	No protein	-	lncRNA	-	-
ENST00000663722.1	LINC02395-232	1406	No protein	-	lncRNA	-	-
ENST00000670836.2	LINC02395-260	1402	No protein	-	lncRNA	-	-
ENST00000653208.1	LINC02395-206	1402	No protein	-	lncRNA	-	-
ENST00000658170.1	LINC02395-220	1367	No protein	-	lncRNA	-	-
ENST00000661149.1	LINC02395-226	1365	No protein	-	lncRNA	-	-
ENST00000670752.1	LINC02395-259	1358	No protein	-	lncRNA	-	-
ENST00000658656.1	LINC02395-222	1358	No protein	-	lncRNA	-	-
ENST00000670552.1	LINC02395-258	1338	No protein	-	lncRNA	-	-
ENST00000654198.1	LINC02395-208	1329	No protein	-	lncRNA	-	-
ENST00000668699.1	LINC02395-249	1328	No protein	-	lncRNA	-	-
ENST00000657295.1	LINC02395-218	1317	No protein	-	lncRNA	-	-
ENST00000669303.1	LINC02395-251	1313	No protein	-	lncRNA	-	-
ENST00000665771.1	LINC02395-241	1300	No protein	-	lncRNA	-	-
ENST00000666502.1	LINC02395-243	1282	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660860.1	LINC02395-225	1269	No protein	-	lncRNA	-	-
ENST00000664040.1	LINC02395-234	1267	No protein	-	lncRNA	-	-
ENST00000663037.1	LINC02395-230	1242	No protein	-	lncRNA	-	-
ENST00000664524.1	LINC02395-236	1200	No protein	-	lncRNA	-	-
ENST00000657128.1	LINC02395-217	1184	No protein	-	lncRNA	-	-
ENST00000667663.1	LINC02395-245	1129	No protein	-	lncRNA	-	-
ENST00000666165.1	LINC02395-242	1123	No protein	-	lncRNA	-	-
ENST00000661879.1	LINC02395-227	1105	No protein	-	lncRNA	-	-
ENST00000656507.1	LINC02395-215	1097	No protein	-	lncRNA	-	-
ENST00000668877.1	LINC02395-250	1069	No protein	-	lncRNA	-	-
ENST00000659513.1	LINC02395-223	1053	No protein	-	lncRNA	-	-
ENST00000658365.1	LINC02395-221	1006	No protein	-	lncRNA	-	-
ENST00000670023.1	LINC02395-255	909	No protein	-	lncRNA	-	-
ENST00000668476.1	LINC02395-248	908	No protein	-	lncRNA	-	-
ENST00000667611.1	LINC02395-244	872	No protein	-	lncRNA	-	-
ENST00000670334.1	LINC02395-257	848	No protein	-	lncRNA	-	-
ENST00000551539.2	LINC02395-205	845	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000828038.1	LINC02395-261	818	No protein	-	lncRNA	-	-
ENST00000547443.1	LINC02395-202	724	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000549734.1	LINC02395-204	617	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,184 bps,

Version

ENST00000657128.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000657128.1 LINC02395-217

Summary

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Transcript: ENST00000657128.1 LINC02395-217

Summary

About Us

Get help

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