Transcript: ENST00000656897.1 LINC03007-210

Description

long intergenic non-protein coding RNA 3007 [Source:HGNC Symbol;Acc:HGNC:56132]

Gene Synonyms

AC005165.1

Location

Chromosome 7: 25,655,206-25,663,140 reverse strand.

About this transcript

This transcript has 4 exons and maps to 331 oligo probes.

Gene

This transcript is a product of gene ENSG00000223561.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000812178.1	LINC03007-227	1912	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000423689.3	LINC03007-201	3111	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000661881.2	LINC03007-217	2242	No protein	-	lncRNA	-	-
ENST00000656871.2	LINC03007-209	1990	No protein	-	lncRNA	-	-
ENST00000671106.2	LINC03007-225	1966	No protein	-	lncRNA	-	-
ENST00000446840.6	LINC03007-202	1920	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000456777.7	LINC03007-203	1863	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000665149.2	LINC03007-220	1780	No protein	-	lncRNA	-	-
ENST00000812183.1	LINC03007-232	1682	No protein	-	lncRNA	-	-
ENST00000659793.2	LINC03007-214	1656	No protein	-	lncRNA	-	-
ENST00000812182.1	LINC03007-231	1648	No protein	-	lncRNA	-	-
ENST00000656897.1	LINC03007-210	1617	No protein	-	lncRNA	-	-
ENST00000669861.2	LINC03007-223	1561	No protein	-	lncRNA	-	-
ENST00000660499.1	LINC03007-215	1517	No protein	-	lncRNA	-	-
ENST00000654115.1	LINC03007-208	1492	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668233.2	LINC03007-222	1474	No protein	-	lncRNA	-	-
ENST00000670917.1	LINC03007-224	1409	No protein	-	lncRNA	-	-
ENST00000661813.1	LINC03007-216	1366	No protein	-	lncRNA	-	-
ENST00000653559.2	LINC03007-206	1286	No protein	-	lncRNA	-	-
ENST00000652885.1	LINC03007-204	1274	No protein	-	lncRNA	-	-
ENST00000658568.1	LINC03007-211	1271	No protein	-	lncRNA	-	-
ENST00000659634.1	LINC03007-213	1270	No protein	-	lncRNA	-	-
ENST00000812193.1	LINC03007-242	1168	No protein	-	lncRNA	-	-
ENST00000812186.1	LINC03007-235	1145	No protein	-	lncRNA	-	-
ENST00000812187.1	LINC03007-236	1141	No protein	-	lncRNA	-	-
ENST00000812206.1	LINC03007-247	1131	No protein	-	lncRNA	-	-
ENST00000812208.1	LINC03007-249	1128	No protein	-	lncRNA	-	-
ENST00000812210.1	LINC03007-250	1113	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812180.1	LINC03007-229	1108	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665954.1	LINC03007-221	1108	No protein	-	lncRNA	-	-
ENST00000812184.1	LINC03007-233	1026	No protein	-	lncRNA	-	-
ENST00000652906.1	LINC03007-205	995	No protein	-	lncRNA	-	-
ENST00000662377.1	LINC03007-218	992	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812190.1	LINC03007-239	961	No protein	-	lncRNA	-	-
ENST00000812205.1	LINC03007-246	943	No protein	-	lncRNA	-	-
ENST00000702191.2	LINC03007-226	878	No protein	-	lncRNA	-	-
ENST00000812207.1	LINC03007-248	841	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812185.1	LINC03007-234	818	No protein	-	lncRNA	-	-
ENST00000812212.1	LINC03007-251	810	No protein	-	lncRNA	-	-
ENST00000812188.1	LINC03007-237	789	No protein	-	lncRNA	-	-
ENST00000664945.1	LINC03007-219	780	No protein	-	lncRNA	-	-
ENST00000812191.1	LINC03007-240	760	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812179.1	LINC03007-228	711	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812203.1	LINC03007-245	697	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812192.1	LINC03007-241	681	No protein	-	lncRNA	-	-
ENST00000659238.1	LINC03007-212	658	No protein	-	lncRNA	-	-
ENST00000812197.1	LINC03007-243	650	No protein	-	lncRNA	-	-
ENST00000812213.1	LINC03007-252	642	No protein	-	lncRNA	-	-
ENST00000812189.1	LINC03007-238	613	No protein	-	lncRNA	-	-
ENST00000653704.1	LINC03007-207	605	No protein	-	lncRNA	-	-
ENST00000812198.1	LINC03007-244	574	No protein	-	lncRNA	-	-
ENST00000812181.1	LINC03007-230	570	No protein	-	lncRNA	-	-
ENST00000812214.1	LINC03007-253	432	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,617 bps,

Version

ENST00000656897.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000656897.1 LINC03007-210

Summary

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Transcript: ENST00000656897.1 LINC03007-210

Summary

About Us

Get help

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