Transcript: ENST00000656857.1 LINC00448-203

Description

long intergenic non-protein coding RNA 448 [Source:HGNC Symbol;Acc:HGNC:42785]

Location

Chromosome 13: 62,731,720-62,796,714 reverse strand.

About this transcript

This transcript has 6 exons and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSG00000228669.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000757076.1	LINC00448-208	591	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000667975.1	LINC00448-206	1146	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657217.1	LINC00448-204	1099	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671427.1	LINC00448-207	1045	No protein	-	lncRNA	-	-
ENST00000656857.1	LINC00448-203	1031	No protein	-	lncRNA	-	-
ENST00000658776.1	LINC00448-205	908	No protein	-	lncRNA	-	-
ENST00000438352.3	LINC00448-201	860	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000757078.1	LINC00448-210	799	No protein	-	lncRNA	-	-
ENST00000757080.1	LINC00448-212	581	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757079.1	LINC00448-211	553	No protein	-	lncRNA	-	-
ENST00000757081.1	LINC00448-213	480	No protein	-	lncRNA	-	-
ENST00000757077.1	LINC00448-209	465	No protein	-	lncRNA	-	-
ENST00000757086.1	LINC00448-218	445	No protein	-	lncRNA	-	-
ENST00000448411.1	LINC00448-202	433	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000757083.1	LINC00448-215	425	No protein	-	lncRNA	-	-
ENST00000757082.1	LINC00448-214	379	No protein	-	lncRNA	-	-
ENST00000757084.1	LINC00448-216	360	No protein	-	lncRNA	-	-
ENST00000757085.1	LINC00448-217	348	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,031 bps,

Version

ENST00000656857.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000656857.1 LINC00448-203

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Transcript: ENST00000656857.1 LINC00448-203

Summary

About Us

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