Transcript: ENST00000655931.1 LINC01500-209

Description

long intergenic non-protein coding RNA 1500 [Source:HGNC Symbol;Acc:HGNC:51166]

Location

Chromosome 14: 58,828,259-59,022,105 forward strand.

About this transcript

This transcript has 10 exons and maps to 189 oligo probes.

Gene

This transcript is a product of gene ENSG00000258583.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000648996.1	LINC01500-205	2103	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655931.1	LINC01500-209	1689	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666714.1	LINC01500-226	1618	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662717.1	LINC01500-222	1559	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658696.1	LINC01500-214	1513	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660465.1	LINC01500-218	1449	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663641.1	LINC01500-224	1414	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658421.1	LINC01500-213	1344	No protein	-	lncRNA	-	-
ENST00000657369.1	LINC01500-211	1300	No protein	-	lncRNA	-	-
ENST00000665985.1	LINC01500-225	1273	No protein	-	lncRNA	-	-
ENST00000666814.1	LINC01500-227	1221	No protein	-	lncRNA	-	-
ENST00000656663.1	LINC01500-210	1205	No protein	-	lncRNA	-	-
ENST00000669795.1	LINC01500-230	1204	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663442.1	LINC01500-223	1186	No protein	-	lncRNA	-	-
ENST00000654847.1	LINC01500-207	1179	No protein	-	lncRNA	-	-
ENST00000661873.1	LINC01500-220	1174	No protein	-	lncRNA	-	-
ENST00000553762.2	LINC01500-201	1154	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000655076.1	LINC01500-208	1145	No protein	-	lncRNA	-	-
ENST00000659176.1	LINC01500-216	1122	No protein	-	lncRNA	-	-
ENST00000667158.1	LINC01500-228	1096	No protein	-	lncRNA	-	-
ENST00000654440.1	LINC01500-206	1046	No protein	-	lncRNA	-	-
ENST00000776560.1	LINC01500-232	1021	No protein	-	lncRNA	-	-
ENST00000662599.1	LINC01500-221	1004	No protein	-	lncRNA	-	-
ENST00000659718.1	LINC01500-217	985	No protein	-	lncRNA	-	-
ENST00000658062.1	LINC01500-212	975	No protein	-	lncRNA	-	-
ENST00000776559.1	LINC01500-231	940	No protein	-	lncRNA	-	-
ENST00000660792.1	LINC01500-219	915	No protein	-	lncRNA	-	-
ENST00000667162.1	LINC01500-229	905	No protein	-	lncRNA	-	-
ENST00000658808.1	LINC01500-215	900	No protein	-	lncRNA	-	-
ENST00000556815.6	LINC01500-204	890	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000776565.1	LINC01500-237	783	No protein	-	lncRNA	-	-
ENST00000776561.1	LINC01500-233	734	No protein	-	lncRNA	-	-
ENST00000776562.1	LINC01500-234	734	No protein	-	lncRNA	-	-
ENST00000776564.1	LINC01500-236	694	No protein	-	lncRNA	-	-
ENST00000555378.5	LINC01500-202	691	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000776566.1	LINC01500-238	690	No protein	-	lncRNA	-	-
ENST00000776563.1	LINC01500-235	665	No protein	-	lncRNA	-	-
ENST00000776567.1	LINC01500-239	665	No protein	-	lncRNA	-	-
ENST00000556026.1	LINC01500-203	429	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,689 bps,

Version

ENST00000655931.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000655931.1 LINC01500-209

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Transcript: ENST00000655931.1 LINC01500-209

Summary

About Us

Get help

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