Transcript: ENST00000655894.2 LINC01115-205

Description

long intergenic non-protein coding RNA 1115 [Source:HGNC Symbol;Acc:HGNC:49258]

Location

Chromosome 2: 791,494-868,358 reverse strand.

About this transcript

This transcript has 3 exons and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSG00000237667.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000783116.1	LINC01115-211	844	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000659656.1	LINC01115-206	3247	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663151.1	LINC01115-208	3207	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671221.1	LINC01115-210	2865	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662432.2	LINC01115-207	2547	No protein	-	lncRNA	-	-
ENST00000648115.1	LINC01115-203	2212	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000783123.1	LINC01115-218	2202	No protein	-	lncRNA	-	-
ENST00000655805.1	LINC01115-204	1808	No protein	-	lncRNA	-	-
ENST00000621134.4	LINC01115-202	1519	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000670082.1	LINC01115-209	1476	No protein	-	lncRNA	-	-
ENST00000783117.1	LINC01115-212	1407	No protein	-	lncRNA	-	-
ENST00000655894.2	LINC01115-205	1396	No protein	-	lncRNA	-	-
ENST00000783119.1	LINC01115-214	1194	No protein	-	lncRNA	-	-
ENST00000415700.2	LINC01115-201	1125	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000783118.1	LINC01115-213	664	No protein	-	lncRNA	-	-
ENST00000783124.1	LINC01115-219	616	No protein	-	lncRNA	-	-
ENST00000783120.1	LINC01115-215	452	No protein	-	lncRNA	-	-
ENST00000783121.1	LINC01115-216	417	No protein	-	lncRNA	-	-
ENST00000783122.1	LINC01115-217	409	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,396 bps,

Version

ENST00000655894.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000655894.2 LINC01115-205

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Transcript: ENST00000655894.2 LINC01115-205

Summary

About Us

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