Transcript: ENST00000655712.1 LINC02552-207

Description

long intergenic non-protein coding RNA 2552 [Source:HGNC Symbol;Acc:HGNC:53587]

Location

Chromosome 11: 104,561,861-104,609,324 reverse strand.

About this transcript

This transcript has 4 exons and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSG00000256422.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000536529.5	LINC02552-201	652	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000668287.1	LINC02552-222	7709	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670931.1	LINC02552-225	5643	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661353.2	LINC02552-214	5192	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658775.1	LINC02552-210	3745	No protein	-	lncRNA	-	-
ENST00000653654.1	LINC02552-205	3683	No protein	-	lncRNA	-	-
ENST00000670375.1	LINC02552-224	3144	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669770.1	LINC02552-223	3088	No protein	-	lncRNA	-	-
ENST00000659828.1	LINC02552-211	2973	No protein	-	lncRNA	-	-
ENST00000658606.1	LINC02552-209	2312	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653969.1	LINC02552-206	2103	No protein	-	lncRNA	-	-
ENST00000655712.1	LINC02552-207	2076	No protein	-	lncRNA	-	-
ENST00000538641.2	LINC02552-202	1801	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000662458.1	LINC02552-215	1764	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662800.1	LINC02552-216	1468	No protein	-	lncRNA	-	-
ENST00000659889.1	LINC02552-212	1285	No protein	-	lncRNA	-	-
ENST00000667686.1	LINC02552-221	1170	No protein	-	lncRNA	-	-
ENST00000665834.4	LINC02552-219	1087	No protein	-	lncRNA	-	-
ENST00000660494.2	LINC02552-213	1087	No protein	-	lncRNA	-	-
ENST00000666753.1	LINC02552-220	1002	No protein	-	lncRNA	-	-
ENST00000702721.2	LINC02552-226	900	No protein	-	lncRNA	-	-
ENST00000658586.3	LINC02552-208	850	No protein	-	lncRNA	-	-
ENST00000766698.1	LINC02552-228	818	No protein	-	lncRNA	-	-
ENST00000664290.1	LINC02552-217	817	No protein	-	lncRNA	-	-
ENST00000664724.1	LINC02552-218	762	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653300.2	LINC02552-204	688	No protein	-	lncRNA	-	-
ENST00000545630.2	LINC02552-203	673	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000766697.1	LINC02552-227	521	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,076 bps,

Version

ENST00000655712.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000655712.1 LINC02552-207

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Transcript: ENST00000655712.1 LINC02552-207

Summary

About Us

Get help

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