Transcript: ENST00000655417.1 LINC02660-203

Description

long intergenic non-protein coding RNA 2660 [Source:HGNC Symbol;Acc:HGNC:54146]

Location

Chromosome 10: 3,912,023-3,935,812 forward strand.

About this transcript

This transcript has 3 exons and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSG00000226005.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000724600.1	LINC02660-210	1012	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000655417.1	LINC02660-203	1764	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657212.2	LINC02660-205	1454	No protein	-	lncRNA	-	-
ENST00000724620.1	LINC02660-230	1103	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724604.1	LINC02660-214	811	No protein	-	lncRNA	-	-
ENST00000664393.2	LINC02660-206	746	No protein	-	lncRNA	-	-
ENST00000724616.1	LINC02660-226	739	No protein	-	lncRNA	-	-
ENST00000648503.2	LINC02660-202	736	No protein	-	lncRNA	-	-
ENST00000724609.1	LINC02660-219	730	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724615.1	LINC02660-225	725	No protein	-	lncRNA	-	-
ENST00000724619.1	LINC02660-229	724	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724605.1	LINC02660-215	717	No protein	-	lncRNA	-	-
ENST00000724607.1	LINC02660-217	709	No protein	-	lncRNA	-	-
ENST00000724618.1	LINC02660-228	684	No protein	-	lncRNA	-	-
ENST00000724606.1	LINC02660-216	666	No protein	-	lncRNA	-	-
ENST00000724617.1	LINC02660-227	639	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656136.2	LINC02660-204	615	No protein	-	lncRNA	-	-
ENST00000724614.1	LINC02660-224	610	No protein	-	lncRNA	-	-
ENST00000432452.2	LINC02660-201	591	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000687954.3	LINC02660-207	571	No protein	-	lncRNA	-	-
ENST00000692986.2	LINC02660-209	567	No protein	-	lncRNA	-	-
ENST00000724603.1	LINC02660-213	536	No protein	-	lncRNA	-	-
ENST00000724612.1	LINC02660-222	535	No protein	-	lncRNA	-	-
ENST00000724602.1	LINC02660-212	515	No protein	-	lncRNA	-	-
ENST00000691885.2	LINC02660-208	442	No protein	-	lncRNA	-	-
ENST00000724611.1	LINC02660-221	433	No protein	-	lncRNA	-	-
ENST00000724608.1	LINC02660-218	404	No protein	-	lncRNA	-	-
ENST00000724613.1	LINC02660-223	374	No protein	-	lncRNA	-	-
ENST00000724601.1	LINC02660-211	362	No protein	-	lncRNA	-	-
ENST00000724610.1	LINC02660-220	332	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,764 bps,

Version

ENST00000655417.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000655417.1 LINC02660-203

Summary

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Transcript: ENST00000655417.1 LINC02660-203

Summary

About Us

Get help

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