Transcript: ENST00000655240.2 LINC02046-204

Description

long intergenic non-protein coding RNA 2046 [Source:HGNC Symbol;Acc:HGNC:52886]

Location

Chromosome 3: 148,280,914-148,401,084 forward strand.

About this transcript

This transcript has 5 exons and maps to 229 oligo probes.

Gene

This transcript is a product of gene ENSG00000242440.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000655836.1	LINC02046-205	1984	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000655240.2	LINC02046-204	1853	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664156.2	LINC02046-210	1698	No protein	-	lncRNA	-	-
ENST00000654242.1	LINC02046-203	1027	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668285.1	LINC02046-212	989	No protein	-	lncRNA	-	-
ENST00000665545.1	LINC02046-211	972	No protein	-	lncRNA	-	-
ENST00000661886.1	LINC02046-208	965	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655891.1	LINC02046-206	958	No protein	-	lncRNA	-	-
ENST00000658698.1	LINC02046-207	956	No protein	-	lncRNA	-	-
ENST00000752836.1	LINC02046-215	901	No protein	-	lncRNA	-	-
ENST00000752835.1	LINC02046-214	794	No protein	-	lncRNA	-	-
ENST00000671193.1	LINC02046-213	743	No protein	-	lncRNA	-	-
ENST00000663786.1	LINC02046-209	667	No protein	-	lncRNA	-	-
ENST00000469812.2	LINC02046-201	603	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000481334.1	LINC02046-202	390	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,853 bps,

Version

ENST00000655240.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000655240.2 LINC02046-204

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Transcript: ENST00000655240.2 LINC02046-204

Summary

About Us

Get help

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