Transcript: ENST00000655110.2 HISLA-220

Description

HIF1A stabilizing long noncoding RNA [Source:HGNC Symbol;Acc:HGNC:49467]

Gene Synonyms

LINC01146

Location

Chromosome 14: 88,036,872-88,038,489 forward strand.

About this transcript

This transcript has 2 exons and maps to 64 oligo probes.

Gene

This transcript is a product of gene ENSG00000258867.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000828315.1	HISLA-315	601	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000692293.2	HISLA-293	2580	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701408.1	HISLA-309	2358	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828379.1	HISLA-378	2140	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828390.1	HISLA-389	2103	No protein	-	lncRNA	-	-
ENST00000690017.1	HISLA-288	2081	No protein	-	lncRNA	-	-
ENST00000828319.1	HISLA-319	2080	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828318.1	HISLA-318	2021	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665901.1	HISLA-261	1983	No protein	-	lncRNA	-	-
ENST00000656485.1	HISLA-227	1963	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654646.1	HISLA-218	1929	No protein	-	lncRNA	-	-
ENST00000670645.1	HISLA-275	1928	No protein	-	lncRNA	-	-
ENST00000656018.2	HISLA-223	1813	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669517.1	HISLA-270	1752	No protein	-	lncRNA	-	-
ENST00000828372.1	HISLA-372	1732	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662577.2	HISLA-249	1718	No protein	-	lncRNA	-	-
ENST00000701121.2	HISLA-302	1704	No protein	-	lncRNA	-	-
ENST00000655185.1	HISLA-221	1685	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666809.1	HISLA-263	1680	No protein	-	lncRNA	-	-
ENST00000828317.1	HISLA-317	1678	No protein	-	lncRNA	-	-
ENST00000656156.1	HISLA-225	1667	No protein	-	lncRNA	-	-
ENST00000660504.1	HISLA-242	1658	No protein	-	lncRNA	-	-
ENST00000653288.1	HISLA-211	1639	No protein	-	lncRNA	-	-
ENST00000657214.3	HISLA-229	1632	No protein	-	lncRNA	-	-
ENST00000661299.1	HISLA-246	1595	No protein	-	lncRNA	-	-
ENST00000669569.1	HISLA-271	1591	No protein	-	lncRNA	-	-
ENST00000701798.1	HISLA-313	1567	No protein	-	lncRNA	-	-
ENST00000828387.1	HISLA-386	1563	No protein	-	lncRNA	-	-
ENST00000671063.1	HISLA-279	1535	No protein	-	lncRNA	-	-
ENST00000660520.2	HISLA-243	1532	No protein	-	lncRNA	-	-
ENST00000828370.1	HISLA-370	1523	No protein	-	lncRNA	-	-
ENST00000670670.1	HISLA-276	1516	No protein	-	lncRNA	-	-
ENST00000666156.1	HISLA-262	1497	No protein	-	lncRNA	-	-
ENST00000665065.1	HISLA-260	1491	No protein	-	lncRNA	-	-
ENST00000828361.1	HISLA-361	1480	No protein	-	lncRNA	-	-
ENST00000667558.3	HISLA-265	1456	No protein	-	lncRNA	-	-
ENST00000664331.1	HISLA-255	1452	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655699.2	HISLA-222	1446	No protein	-	lncRNA	-	-
ENST00000659391.1	HISLA-238	1437	No protein	-	lncRNA	-	-
ENST00000557339.6	HISLA-207	1433	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000828364.1	HISLA-364	1412	No protein	-	lncRNA	-	-
ENST00000664905.3	HISLA-257	1411	No protein	-	lncRNA	-	-
ENST00000828389.1	HISLA-388	1410	No protein	-	lncRNA	-	-
ENST00000828345.1	HISLA-345	1385	No protein	-	lncRNA	-	-
ENST00000828316.1	HISLA-316	1377	No protein	-	lncRNA	-	-
ENST00000668342.3	HISLA-267	1360	No protein	-	lncRNA	-	-
ENST00000828371.1	HISLA-371	1355	No protein	-	lncRNA	-	-
ENST00000686285.1	HISLA-286	1347	No protein	-	lncRNA	-	-
ENST00000701804.2	HISLA-314	1347	No protein	-	lncRNA	-	-
ENST00000655110.2	HISLA-220	1347	No protein	-	lncRNA	-	-
ENST00000669313.1	HISLA-269	1308	No protein	-	lncRNA	-	-
ENST00000691127.3	HISLA-291	1283	No protein	-	lncRNA	-	-
ENST00000828337.1	HISLA-337	1273	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656986.1	HISLA-228	1270	No protein	-	lncRNA	-	-
ENST00000654510.1	HISLA-217	1265	No protein	-	lncRNA	-	-
ENST00000828356.1	HISLA-356	1260	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828382.1	HISLA-381	1259	No protein	-	lncRNA	-	-
ENST00000828340.1	HISLA-340	1239	No protein	-	lncRNA	-	-
ENST00000700767.2	HISLA-295	1221	No protein	-	lncRNA	-	-
ENST00000658614.1	HISLA-232	1219	No protein	-	lncRNA	-	-
ENST00000828333.1	HISLA-333	1215	No protein	-	lncRNA	-	-
ENST00000700797.1	HISLA-297	1210	No protein	-	lncRNA	-	-
ENST00000654022.1	HISLA-214	1208	No protein	-	lncRNA	-	-
ENST00000658529.3	HISLA-231	1197	No protein	-	lncRNA	-	-
ENST00000659330.1	HISLA-237	1197	No protein	-	lncRNA	-	-
ENST00000670733.1	HISLA-277	1188	No protein	-	lncRNA	-	-
ENST00000663527.1	HISLA-253	1187	No protein	-	lncRNA	-	-
ENST00000701358.2	HISLA-308	1187	No protein	-	lncRNA	-	-
ENST00000556673.2	HISLA-205	1182	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000667759.1	HISLA-266	1180	No protein	-	lncRNA	-	-
ENST00000701744.2	HISLA-312	1169	No protein	-	lncRNA	-	-
ENST00000671585.1	HISLA-283	1160	No protein	-	lncRNA	-	-
ENST00000828341.1	HISLA-341	1158	No protein	-	lncRNA	-	-
ENST00000828373.1	HISLA-373	1158	No protein	-	lncRNA	-	-
ENST00000671685.1	HISLA-284	1156	No protein	-	lncRNA	-	-
ENST00000828334.1	HISLA-334	1154	No protein	-	lncRNA	-	-
ENST00000664976.1	HISLA-259	1153	No protein	-	lncRNA	-	-
ENST00000662785.1	HISLA-251	1148	No protein	-	lncRNA	-	-
ENST00000828362.1	HISLA-362	1139	No protein	-	lncRNA	-	-
ENST00000828363.1	HISLA-363	1137	No protein	-	lncRNA	-	-
ENST00000671198.1	HISLA-281	1134	No protein	-	lncRNA	-	-
ENST00000701194.2	HISLA-305	1133	No protein	-	lncRNA	-	-
ENST00000828385.1	HISLA-384	1124	No protein	-	lncRNA	-	-
ENST00000701152.2	HISLA-304	1118	No protein	-	lncRNA	-	-
ENST00000700788.1	HISLA-296	1117	No protein	-	lncRNA	-	-
ENST00000691198.2	HISLA-292	1112	No protein	-	lncRNA	-	-
ENST00000828347.1	HISLA-347	1110	No protein	-	lncRNA	-	-
ENST00000670474.1	HISLA-274	1100	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828329.1	HISLA-329	1100	No protein	-	lncRNA	-	-
ENST00000661820.1	HISLA-247	1099	No protein	-	lncRNA	-	-
ENST00000828360.1	HISLA-360	1096	No protein	-	lncRNA	-	-
ENST00000653202.2	HISLA-210	1094	No protein	-	lncRNA	-	-
ENST00000556684.6	HISLA-206	1093	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000669790.2	HISLA-272	1084	No protein	-	lncRNA	-	-
ENST00000658103.1	HISLA-230	1082	No protein	-	lncRNA	-	-
ENST00000828367.1	HISLA-367	1075	No protein	-	lncRNA	-	-
ENST00000671064.2	HISLA-280	1068	No protein	-	lncRNA	-	-
ENST00000660744.1	HISLA-245	1067	No protein	-	lncRNA	-	-
ENST00000828386.1	HISLA-385	1063	No protein	-	lncRNA	-	-
ENST00000660271.1	HISLA-240	1056	No protein	-	lncRNA	-	-
ENST00000828336.1	HISLA-336	1054	No protein	-	lncRNA	-	-
ENST00000828366.1	HISLA-366	1052	No protein	-	lncRNA	-	-
ENST00000656466.1	HISLA-226	1047	No protein	-	lncRNA	-	-
ENST00000828344.1	HISLA-344	1046	No protein	-	lncRNA	-	-
ENST00000653337.1	HISLA-212	1045	No protein	-	lncRNA	-	-
ENST00000660665.2	HISLA-244	1043	No protein	-	lncRNA	-	-
ENST00000828325.1	HISLA-325	1038	No protein	-	lncRNA	-	-
ENST00000659115.2	HISLA-236	1037	No protein	-	lncRNA	-	-
ENST00000828380.1	HISLA-379	1034	No protein	-	lncRNA	-	-
ENST00000668853.1	HISLA-268	1024	No protein	-	lncRNA	-	-
ENST00000828359.1	HISLA-359	1014	No protein	-	lncRNA	-	-
ENST00000828326.1	HISLA-326	1010	No protein	-	lncRNA	-	-
ENST00000654427.1	HISLA-216	1006	No protein	-	lncRNA	-	-
ENST00000828381.1	HISLA-380	1002	No protein	-	lncRNA	-	-
ENST00000654359.1	HISLA-215	1001	No protein	-	lncRNA	-	-
ENST00000664613.3	HISLA-256	991	No protein	-	lncRNA	-	-
ENST00000660394.2	HISLA-241	991	No protein	-	lncRNA	-	-
ENST00000828324.1	HISLA-324	991	No protein	-	lncRNA	-	-
ENST00000664272.2	HISLA-254	988	No protein	-	lncRNA	-	-
ENST00000828348.1	HISLA-348	987	No protein	-	lncRNA	-	-
ENST00000828346.1	HISLA-346	985	No protein	-	lncRNA	-	-
ENST00000659555.2	HISLA-239	981	No protein	-	lncRNA	-	-
ENST00000555996.6	HISLA-203	975	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000828351.1	HISLA-351	971	No protein	-	lncRNA	-	-
ENST00000670811.1	HISLA-278	968	No protein	-	lncRNA	-	-
ENST00000688445.3	HISLA-287	962	No protein	-	lncRNA	-	-
ENST00000656043.1	HISLA-224	951	No protein	-	lncRNA	-	-
ENST00000700932.1	HISLA-299	948	No protein	-	lncRNA	-	-
ENST00000828339.1	HISLA-339	946	No protein	-	lncRNA	-	-
ENST00000686044.2	HISLA-285	944	No protein	-	lncRNA	-	-
ENST00000828332.1	HISLA-332	937	No protein	-	lncRNA	-	-
ENST00000654831.1	HISLA-219	932	No protein	-	lncRNA	-	-
ENST00000690956.3	HISLA-290	931	No protein	-	lncRNA	-	-
ENST00000653115.2	HISLA-209	925	No protein	-	lncRNA	-	-
ENST00000828323.1	HISLA-323	923	No protein	-	lncRNA	-	-
ENST00000828327.1	HISLA-327	920	No protein	-	lncRNA	-	-
ENST00000693558.2	HISLA-294	918	No protein	-	lncRNA	-	-
ENST00000662304.1	HISLA-248	917	No protein	-	lncRNA	-	-
ENST00000828331.1	HISLA-331	905	No protein	-	lncRNA	-	-
ENST00000828368.1	HISLA-368	905	No protein	-	lncRNA	-	-
ENST00000701126.2	HISLA-303	888	No protein	-	lncRNA	-	-
ENST00000556033.7	HISLA-204	878	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000828365.1	HISLA-365	876	No protein	-	lncRNA	-	-
ENST00000701015.2	HISLA-301	873	No protein	-	lncRNA	-	-
ENST00000701472.2	HISLA-310	873	No protein	-	lncRNA	-	-
ENST00000701642.2	HISLA-311	872	No protein	-	lncRNA	-	-
ENST00000701354.1	HISLA-307	870	No protein	-	lncRNA	-	-
ENST00000828335.1	HISLA-335	870	No protein	-	lncRNA	-	-
ENST00000828330.1	HISLA-330	863	No protein	-	lncRNA	-	-
ENST00000828353.1	HISLA-353	860	No protein	-	lncRNA	-	-
ENST00000662720.1	HISLA-250	857	No protein	-	lncRNA	-	-
ENST00000828343.1	HISLA-343	857	No protein	-	lncRNA	-	-
ENST00000664916.4	HISLA-258	843	No protein	-	lncRNA	-	-
ENST00000658873.1	HISLA-235	827	No protein	-	lncRNA	-	-
ENST00000828338.1	HISLA-338	818	No protein	-	lncRNA	-	-
ENST00000828328.1	HISLA-328	817	No protein	-	lncRNA	-	-
ENST00000658804.1	HISLA-234	816	No protein	-	lncRNA	-	-
ENST00000828376.1	HISLA-376	814	No protein	-	lncRNA	-	-
ENST00000653532.1	HISLA-213	812	No protein	-	lncRNA	-	-
ENST00000828358.1	HISLA-358	806	No protein	-	lncRNA	-	-
ENST00000690670.2	HISLA-289	803	No protein	-	lncRNA	-	-
ENST00000658802.2	HISLA-233	784	No protein	-	lncRNA	-	-
ENST00000828375.1	HISLA-375	782	No protein	-	lncRNA	-	-
ENST00000828369.1	HISLA-369	760	No protein	-	lncRNA	-	-
ENST00000828342.1	HISLA-342	755	No protein	-	lncRNA	-	-
ENST00000828349.1	HISLA-349	749	No protein	-	lncRNA	-	-
ENST00000828383.1	HISLA-382	746	No protein	-	lncRNA	-	-
ENST00000828384.1	HISLA-383	745	No protein	-	lncRNA	-	-
ENST00000828354.1	HISLA-354	741	No protein	-	lncRNA	-	-
ENST00000663488.1	HISLA-252	734	No protein	-	lncRNA	-	-
ENST00000828355.1	HISLA-355	661	No protein	-	lncRNA	-	-
ENST00000700936.2	HISLA-300	658	No protein	-	lncRNA	-	-
ENST00000828352.1	HISLA-352	655	No protein	-	lncRNA	-	-
ENST00000828321.1	HISLA-321	639	No protein	-	lncRNA	-	-
ENST00000828350.1	HISLA-350	629	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671337.1	HISLA-282	605	No protein	-	lncRNA	-	-
ENST00000701332.1	HISLA-306	589	No protein	-	lncRNA	-	-
ENST00000667100.1	HISLA-264	588	No protein	-	lncRNA	-	-
ENST00000828357.1	HISLA-357	588	No protein	-	lncRNA	-	-
ENST00000828377.1	HISLA-377	585	No protein	-	lncRNA	-	-
ENST00000670285.1	HISLA-273	571	No protein	-	lncRNA	-	-
ENST00000700872.2	HISLA-298	560	No protein	-	lncRNA	-	-
ENST00000557355.1	HISLA-208	548	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000828320.1	HISLA-320	519	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828322.1	HISLA-322	507	No protein	-	lncRNA	-	-
ENST00000828374.1	HISLA-374	467	No protein	-	lncRNA	-	-
ENST00000553496.1	HISLA-201	425	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000828391.1	HISLA-390	419	No protein	-	lncRNA	-	-
ENST00000553929.5	HISLA-202	413	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000828388.1	HISLA-387	383	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,347 bps,

Version

ENST00000655110.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000655110.2 HISLA-220

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000655110.2 HISLA-220

Summary

About Us

Get help

Our sister sites

Follow us