Transcript: ENST00000655067.2 LINC01266-204

Description

long intergenic non-protein coding RNA 1266 [Source:HGNC Symbol;Acc:HGNC:50309]

Location

Chromosome 3: 536,242-842,606 forward strand.

About this transcript

This transcript has 6 exons and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000224957.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000794129.1	LINC01266-213	595	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000667456.3	LINC01266-210	4611	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661103.1	LINC01266-206	4567	No protein	-	lncRNA	-	-
ENST00000656558.1	LINC01266-205	4515	No protein	-	lncRNA	-	-
ENST00000420823.5	LINC01266-201	3948	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000653731.1	LINC01266-203	3379	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664893.1	LINC01266-209	2708	No protein	-	lncRNA	-	-
ENST00000661727.1	LINC01266-207	1915	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661877.1	LINC01266-208	1799	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794138.1	LINC01266-222	1287	No protein	-	lncRNA	-	-
ENST00000794136.1	LINC01266-220	1112	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668617.2	LINC01266-211	1084	No protein	-	lncRNA	-	-
ENST00000794135.1	LINC01266-219	1034	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794132.1	LINC01266-216	736	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794133.1	LINC01266-217	651	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794143.1	LINC01266-227	649	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655067.2	LINC01266-204	645	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794144.1	LINC01266-228	634	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000442809.1	LINC01266-202	586	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000794137.1	LINC01266-221	583	No protein	-	lncRNA	-	-
ENST00000794142.1	LINC01266-226	567	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794131.1	LINC01266-215	504	No protein	-	lncRNA	-	-
ENST00000794141.1	LINC01266-225	490	No protein	-	lncRNA	-	-
ENST00000794139.1	LINC01266-223	476	No protein	-	lncRNA	-	-
ENST00000794145.1	LINC01266-229	450	No protein	-	lncRNA	-	-
ENST00000702265.1	LINC01266-212	377	No protein	-	lncRNA	-	-
ENST00000794130.1	LINC01266-214	346	No protein	-	lncRNA	-	-
ENST00000794140.1	LINC01266-224	328	No protein	-	lncRNA	-	-
ENST00000794134.1	LINC01266-218	306	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 645 bps,

Version

ENST00000655067.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000655067.2 LINC01266-204

Summary

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Transcript: ENST00000655067.2 LINC01266-204

Summary

About Us

Get help

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