Transcript: ENST00000655038.1 LINC01235-203

Description

long intergenic non-protein coding RNA 1235 [Source:HGNC Symbol;Acc:HGNC:49769]

Gene Synonyms

FLJ41200

Location

Chromosome 9: 13,407,521-13,433,041 reverse strand.

About this transcript

This transcript has 3 exons and maps to 96 oligo probes.

Gene

This transcript is a product of gene ENSG00000270547.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000668698.1	LINC01235-206	1363	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000604724.7	LINC01235-201	2619	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000605459.3	LINC01235-202	2148	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000663740.1	LINC01235-205	1462	No protein	-	lncRNA	-	-
ENST00000661860.1	LINC01235-204	1292	No protein	-	lncRNA	-	-
ENST00000655038.1	LINC01235-203	1226	No protein	-	lncRNA	-	-
ENST00000840313.1	LINC01235-210	784	No protein	-	lncRNA	-	-
ENST00000840314.1	LINC01235-211	755	No protein	-	lncRNA	-	-
ENST00000840312.1	LINC01235-209	683	No protein	-	lncRNA	-	-
ENST00000840311.1	LINC01235-208	655	No protein	-	lncRNA	-	-
ENST00000840316.1	LINC01235-213	586	No protein	-	lncRNA	-	-
ENST00000840315.1	LINC01235-212	550	No protein	-	lncRNA	-	-
ENST00000840310.1	LINC01235-207	523	No protein	-	lncRNA	-	-
ENST00000840318.1	LINC01235-215	462	No protein	-	lncRNA	-	-
ENST00000840317.1	LINC01235-214	342	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,226 bps,

Version

ENST00000655038.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000655038.1 LINC01235-203

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Transcript: ENST00000655038.1 LINC01235-203

Summary

About Us

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