Transcript: ENST00000654756.1 LINC01224-210

Description

long intergenic non-protein coding RNA 1224 [Source:HGNC Symbol;Acc:HGNC:49676]

Location

Chromosome 19: 23,400,290-23,403,419 reverse strand.

About this transcript

This transcript has 2 exons and maps to 242 oligo probes.

Gene

This transcript is a product of gene ENSG00000269416.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000817170.1	LINC01224-213	641	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000596283.5	LINC01224-203	2766	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000600643.6	LINC01224-206	2460	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000654756.1	LINC01224-210	2001	No protein	-	lncRNA	-	-
ENST00000688559.1	LINC01224-212	1338	No protein	-	lncRNA	-	-
ENST00000817172.1	LINC01224-215	1128	No protein	-	lncRNA	-	-
ENST00000817175.1	LINC01224-218	1010	No protein	-	lncRNA	-	-
ENST00000684878.2	LINC01224-211	1004	No protein	-	lncRNA	-	-
ENST00000594576.6	LINC01224-202	999	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000593573.6	LINC01224-201	925	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000817190.1	LINC01224-233	773	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000817191.1	LINC01224-234	755	No protein	-	lncRNA	-	-
ENST00000817174.1	LINC01224-217	742	No protein	-	lncRNA	-	-
ENST00000817202.1	LINC01224-245	738	No protein	-	lncRNA	-	-
ENST00000817205.1	LINC01224-248	687	No protein	-	lncRNA	-	-
ENST00000817173.1	LINC01224-216	678	No protein	-	lncRNA	-	-
ENST00000601338.6	LINC01224-208	665	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000596763.2	LINC01224-204	659	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000817198.1	LINC01224-241	655	No protein	-	lncRNA	-	-
ENST00000601293.6	LINC01224-207	651	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000817201.1	LINC01224-244	648	No protein	-	lncRNA	-	-
ENST00000602077.6	LINC01224-209	647	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000817195.1	LINC01224-238	636	No protein	-	lncRNA	-	-
ENST00000598922.2	LINC01224-205	623	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000817182.1	LINC01224-225	619	No protein	-	lncRNA	-	-
ENST00000817171.1	LINC01224-214	602	No protein	-	lncRNA	-	-
ENST00000817196.1	LINC01224-239	555	No protein	-	lncRNA	-	-
ENST00000817177.1	LINC01224-220	547	No protein	-	lncRNA	-	-
ENST00000817200.1	LINC01224-243	536	No protein	-	lncRNA	-	-
ENST00000817203.1	LINC01224-246	533	No protein	-	lncRNA	-	-
ENST00000817186.1	LINC01224-229	529	No protein	-	lncRNA	-	-
ENST00000817199.1	LINC01224-242	500	No protein	-	lncRNA	-	-
ENST00000817194.1	LINC01224-237	499	No protein	-	lncRNA	-	-
ENST00000817192.1	LINC01224-235	496	No protein	-	lncRNA	-	-
ENST00000817197.1	LINC01224-240	467	No protein	-	lncRNA	-	-
ENST00000817185.1	LINC01224-228	465	No protein	-	lncRNA	-	-
ENST00000817204.1	LINC01224-247	462	No protein	-	lncRNA	-	-
ENST00000817178.1	LINC01224-221	449	No protein	-	lncRNA	-	-
ENST00000817184.1	LINC01224-227	449	No protein	-	lncRNA	-	-
ENST00000817183.1	LINC01224-226	448	No protein	-	lncRNA	-	-
ENST00000817188.1	LINC01224-231	429	No protein	-	lncRNA	-	-
ENST00000817179.1	LINC01224-222	417	No protein	-	lncRNA	-	-
ENST00000817187.1	LINC01224-230	397	No protein	-	lncRNA	-	-
ENST00000817176.1	LINC01224-219	396	No protein	-	lncRNA	-	-
ENST00000817189.1	LINC01224-232	385	No protein	-	lncRNA	-	-
ENST00000817180.1	LINC01224-223	377	No protein	-	lncRNA	-	-
ENST00000817181.1	LINC01224-224	356	No protein	-	lncRNA	-	-
ENST00000817193.1	LINC01224-236	344	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,001 bps,

Version

ENST00000654756.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000654756.1 LINC01224-210

Summary

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Transcript: ENST00000654756.1 LINC01224-210

Summary

About Us

Get help

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