Transcript: ENST00000654596.2 LINC01350-206

Description

long intergenic non-protein coding RNA 1350 [Source:HGNC Symbol;Acc:HGNC:50575]

Location

Chromosome 1: 185,607,138-185,628,504 reverse strand.

About this transcript

This transcript has 4 exons and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000228309.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000655976.1	LINC01350-209	1068	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000667796.1	LINC01350-217	1290	No protein	-	lncRNA	-	-
ENST00000670065.1	LINC01350-221	930	No protein	-	lncRNA	-	-
ENST00000439633.7	LINC01350-202	871	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000667960.1	LINC01350-218	853	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665770.1	LINC01350-213	806	No protein	-	lncRNA	-	-
ENST00000609066.6	LINC01350-204	796	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000665999.1	LINC01350-214	738	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655092.1	LINC01350-207	727	No protein	-	lncRNA	-	-
ENST00000436955.2	LINC01350-201	684	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000670075.1	LINC01350-222	672	No protein	-	lncRNA	-	-
ENST00000608417.6	LINC01350-203	631	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000655693.1	LINC01350-208	626	No protein	-	lncRNA	-	-
ENST00000654367.2	LINC01350-205	625	No protein	-	lncRNA	-	-
ENST00000785779.1	LINC01350-227	591	No protein	-	lncRNA	-	-
ENST00000667194.1	LINC01350-216	584	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669266.1	LINC01350-220	580	No protein	-	lncRNA	-	-
ENST00000785775.1	LINC01350-223	571	No protein	-	lncRNA	-	-
ENST00000666202.2	LINC01350-215	569	No protein	-	lncRNA	-	-
ENST00000665129.2	LINC01350-212	556	No protein	-	lncRNA	-	-
ENST00000654596.2	LINC01350-206	539	No protein	-	lncRNA	-	-
ENST00000662341.1	LINC01350-211	517	No protein	-	lncRNA	-	-
ENST00000785778.1	LINC01350-226	477	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785776.1	LINC01350-224	474	No protein	-	lncRNA	-	-
ENST00000657435.2	LINC01350-210	472	No protein	-	lncRNA	-	-
ENST00000669189.2	LINC01350-219	454	No protein	-	lncRNA	-	-
ENST00000785780.1	LINC01350-228	411	No protein	-	lncRNA	-	-
ENST00000785777.1	LINC01350-225	388	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 539 bps,

Version

ENST00000654596.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000654596.2 LINC01350-206

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Transcript: ENST00000654596.2 LINC01350-206

Summary

About Us

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