Transcript: ENST00000654520.1 LINC01808-204

Description

long intergenic non-protein coding RNA 1808 [Source:HGNC Symbol;Acc:HGNC:52611]

Location

Chromosome 2: 19,469,379-19,488,856 forward strand.

About this transcript

This transcript has 4 exons and maps to 210 oligo probes.

Gene

This transcript is a product of gene ENSG00000237992.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000641680.1	LINC01808-202	1116	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000641932.1	LINC01808-203	1643	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670653.2	LINC01808-210	1261	No protein	-	lncRNA	-	-
ENST00000657829.1	LINC01808-205	1235	No protein	-	lncRNA	-	-
ENST00000822351.1	LINC01808-211	1132	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663794.1	LINC01808-207	1036	No protein	-	lncRNA	-	-
ENST00000659488.1	LINC01808-206	915	No protein	-	lncRNA	-	-
ENST00000666694.1	LINC01808-208	912	No protein	-	lncRNA	-	-
ENST00000450628.2	LINC01808-201	837	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000654520.1	LINC01808-204	811	No protein	-	lncRNA	-	-
ENST00000669699.1	LINC01808-209	697	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 811 bps,

Version

ENST00000654520.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000654520.1 LINC01808-204

Summary

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Transcript: ENST00000654520.1 LINC01808-204

Summary

About Us

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