Transcript: ENST00000654166.2 LINC01547-204

Description

long intergenic non-protein coding RNA 1547 [Source:HGNC Symbol;Acc:HGNC:15707]

Gene Synonyms

C21ORF67, C21ORF69

Location

Chromosome 21: 44,933,315-44,939,941 reverse strand.

About this transcript

This transcript has 4 exons and maps to 436 oligo probes.

Gene

This transcript is a product of gene ENSG00000183250.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000615847.3	LINC01547-203	3312	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000667826.1	LINC01547-210	4434	No protein	-	lncRNA	-	-
ENST00000663249.1	LINC01547-208	3534	No protein	-	lncRNA	-	-
ENST00000658179.2	LINC01547-206	3202	No protein	-	lncRNA	-	-
ENST00000654166.2	LINC01547-204	2979	No protein	-	lncRNA	-	-
ENST00000657006.1	LINC01547-205	2784	No protein	-	lncRNA	-	-
ENST00000660377.3	LINC01547-207	2413	No protein	-	lncRNA	-	-
ENST00000397841.5	LINC01547-202	2303	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000690957.2	LINC01547-211	1504	No protein	-	lncRNA	-	-
ENST00000664358.1	LINC01547-209	1501	No protein	-	lncRNA	-	-
ENST00000330551.3	LINC01547-201	1033	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000835333.1	LINC01547-213	953	No protein	-	lncRNA	-	-
ENST00000835334.1	LINC01547-214	897	No protein	-	lncRNA	-	-
ENST00000835332.1	LINC01547-212	810	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,979 bps,

Version

ENST00000654166.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000654166.2 LINC01547-204

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Transcript: ENST00000654166.2 LINC01547-204

Summary

About Us

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