Transcript: ENST00000653974.1 CT69-203

Description

cancer/testis associated transcript 69 [Source:HGNC Symbol;Acc:HGNC:37196]

Location

Chromosome 6: 134,428,243-134,454,583 reverse strand.

About this transcript

This transcript has 3 exons and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSG00000231971.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000718375.1	CT69-213	652	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000718381.1	CT69-219	3479	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718377.1	CT69-215	1659	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657570.1	CT69-206	1559	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660051.1	CT69-208	1422	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718386.1	CT69-224	1368	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000417483.5	CT69-201	1360	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000656511.1	CT69-205	1313	No protein	-	lncRNA	-	-
ENST00000668601.1	CT69-212	1224	No protein	-	lncRNA	-	-
ENST00000653974.1	CT69-203	1172	No protein	-	lncRNA	-	-
ENST00000655225.1	CT69-204	1109	No protein	-	lncRNA	-	-
ENST00000664953.1	CT69-210	1083	No protein	-	lncRNA	-	-
ENST00000718383.1	CT69-221	962	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000422736.2	CT69-202	944	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000718380.1	CT69-218	941	No protein	-	lncRNA	-	-
ENST00000718376.1	CT69-214	901	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718378.1	CT69-216	900	No protein	-	lncRNA	-	-
ENST00000718388.1	CT69-226	817	No protein	-	lncRNA	-	-
ENST00000718382.1	CT69-220	771	No protein	-	lncRNA	-	-
ENST00000667818.1	CT69-211	764	No protein	-	lncRNA	-	-
ENST00000718385.1	CT69-223	749	No protein	-	lncRNA	-	-
ENST00000659858.1	CT69-207	674	No protein	-	lncRNA	-	-
ENST00000718387.1	CT69-225	628	No protein	-	lncRNA	-	-
ENST00000661465.1	CT69-209	606	No protein	-	lncRNA	-	-
ENST00000718384.1	CT69-222	601	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718379.1	CT69-217	512	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,172 bps,

Version

ENST00000653974.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000653974.1 CT69-203

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Transcript: ENST00000653974.1 CT69-203

Summary

About Us

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