Transcript: ENST00000653867.1 LINC01792-202

Description

long intergenic non-protein coding RNA 1792 [Source:HGNC Symbol;Acc:HGNC:52582]

Location

Chromosome 2: 200,713,482-200,735,175 reverse strand.

About this transcript

This transcript has 4 exons and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSG00000237166.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000785703.1	LINC01792-207	2690	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000661396.2	LINC01792-204	2846	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000452787.3	LINC01792-201	2568	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000785705.1	LINC01792-209	2314	No protein	-	lncRNA	-	-
ENST00000785704.1	LINC01792-208	2221	No protein	-	lncRNA	-	-
ENST00000785713.1	LINC01792-217	1447	No protein	-	lncRNA	-	-
ENST00000655127.1	LINC01792-203	1298	No protein	-	lncRNA	-	-
ENST00000785706.1	LINC01792-210	1291	No protein	-	lncRNA	-	-
ENST00000785710.1	LINC01792-214	1267	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653867.1	LINC01792-202	1151	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785709.1	LINC01792-213	1079	No protein	-	lncRNA	-	-
ENST00000663258.1	LINC01792-205	1043	No protein	-	lncRNA	-	-
ENST00000785711.1	LINC01792-215	1035	No protein	-	lncRNA	-	-
ENST00000785707.1	LINC01792-211	1001	No protein	-	lncRNA	-	-
ENST00000701746.1	LINC01792-206	916	No protein	-	lncRNA	-	-
ENST00000785712.1	LINC01792-216	843	No protein	-	lncRNA	-	-
ENST00000785708.1	LINC01792-212	800	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,151 bps,

Version

ENST00000653867.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000653867.1 LINC01792-202

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Transcript: ENST00000653867.1 LINC01792-202

Summary

About Us

Get help

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