Transcript: ENST00000653805.2 LINC02053-203

Description

long intergenic non-protein coding RNA 2053 [Source:HGNC Symbol;Acc:HGNC:52893]

Location

Chromosome 3: 180,414,145-180,422,508 forward strand.

About this transcript

This transcript has 2 exons and maps to 274 oligo probes.

Gene

This transcript is a product of gene ENSG00000241696.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000831001.1	LINC02053-208	538	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000654328.1	LINC02053-204	1604	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670709.1	LINC02053-206	1300	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000831010.1	LINC02053-217	1110	No protein	-	lncRNA	-	-
ENST00000831003.1	LINC02053-210	974	No protein	-	lncRNA	-	-
ENST00000653805.2	LINC02053-203	971	No protein	-	lncRNA	-	-
ENST00000488262.1	LINC02053-202	940	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000831006.1	LINC02053-213	881	No protein	-	lncRNA	-	-
ENST00000831005.1	LINC02053-212	845	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000831004.1	LINC02053-211	741	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000831007.1	LINC02053-214	721	No protein	-	lncRNA	-	-
ENST00000670884.2	LINC02053-207	712	No protein	-	lncRNA	-	-
ENST00000831002.1	LINC02053-209	646	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000464537.2	LINC02053-201	644	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000831009.1	LINC02053-216	620	No protein	-	lncRNA	-	-
ENST00000668671.2	LINC02053-205	611	No protein	-	lncRNA	-	-
ENST00000831008.1	LINC02053-215	533	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 971 bps,

Version

ENST00000653805.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000653805.2 LINC02053-203

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Transcript: ENST00000653805.2 LINC02053-203

Summary

About Us

Get help

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