Transcript: ENST00000653660.1 LINC00278-205

Description

long intergenic non-protein coding RNA 278 [Source:HGNC Symbol;Acc:HGNC:38712]

Gene Synonyms

NCRNA00278, YY1BM

Location

Chromosome Y: 3,003,001-3,110,315 forward strand.

About this transcript

This transcript has 5 exons and maps to 155 oligo probes.

Gene

This transcript is a product of gene ENSG00000231535.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000665487.1	LINC00278-208	1341	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685199.2	LINC00278-209	1912	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000803195.1	LINC00278-216	1633	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000651090.1	LINC00278-203	1582	No protein	-	lncRNA	-	-
ENST00000444263.6	LINC00278-202	1209	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000654222.1	LINC00278-206	1140	No protein	-	lncRNA	-	-
ENST00000803197.1	LINC00278-218	1083	No protein	-	lncRNA	-	-
ENST00000653660.1	LINC00278-205	1015	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000803191.1	LINC00278-212	939	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000803196.1	LINC00278-217	904	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652068.1	LINC00278-204	890	No protein	-	lncRNA	-	-
ENST00000803190.1	LINC00278-211	867	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655607.2	LINC00278-207	826	No protein	-	lncRNA	-	-
ENST00000803194.1	LINC00278-215	808	No protein	-	lncRNA	-	-
ENST00000803192.1	LINC00278-213	760	No protein	-	lncRNA	-	-
ENST00000691894.1	LINC00278-210	749	No protein	-	lncRNA	-	-
ENST00000803193.1	LINC00278-214	688	No protein	-	lncRNA	-	-
ENST00000425031.2	LINC00278-201	620	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,015 bps,

Version

ENST00000653660.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000653660.1 LINC00278-205

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Transcript: ENST00000653660.1 LINC00278-205

Summary

About Us

Get help

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