Transcript: ENST00000653584.1 LINC00847-209

Description

long intergenic non-protein coding RNA 847 [Source:HGNC Symbol;Acc:HGNC:45050]

Location

Chromosome 5: 180,834,010-180,835,705 forward strand.

About this transcript

This transcript has 2 exons and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSG00000245060.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000651233.1	LINC00847-206	4044	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000501855.6	LINC00847-201	1871	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000659553.1	LINC00847-215	1817	No protein	-	lncRNA	-	-
ENST00000502162.2	LINC00847-203	1809	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000501937.2	LINC00847-202	1809	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000658025.1	LINC00847-212	1779	No protein	-	lncRNA	-	-
ENST00000654313.1	LINC00847-210	1762	No protein	-	lncRNA	-	-
ENST00000661810.1	LINC00847-219	1738	No protein	-	lncRNA	-	-
ENST00000657229.1	LINC00847-211	1713	No protein	-	lncRNA	-	-
ENST00000653411.1	LINC00847-208	1708	No protein	-	lncRNA	-	-
ENST00000659497.1	LINC00847-214	1703	No protein	-	lncRNA	-	-
ENST00000661444.1	LINC00847-218	1683	No protein	-	lncRNA	-	-
ENST00000509921.2	LINC00847-205	1648	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000751569.1	LINC00847-224	1611	No protein	-	lncRNA	-	-
ENST00000660674.1	LINC00847-216	1602	No protein	-	lncRNA	-	-
ENST00000658585.1	LINC00847-213	1594	No protein	-	lncRNA	-	-
ENST00000751568.1	LINC00847-223	1555	No protein	-	lncRNA	-	-
ENST00000652659.1	LINC00847-207	1498	No protein	-	lncRNA	-	-
ENST00000665473.1	LINC00847-221	1445	No protein	-	lncRNA	-	-
ENST00000653584.1	LINC00847-209	1365	No protein	-	lncRNA	-	-
ENST00000667360.1	LINC00847-222	1321	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661298.1	LINC00847-217	1267	No protein	-	lncRNA	-	-
ENST00000508309.2	LINC00847-204	1231	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000662722.1	LINC00847-220	1160	No protein	-	lncRNA	-	-
ENST00000751573.1	LINC00847-228	1139	No protein	-	lncRNA	-	-
ENST00000751583.1	LINC00847-238	1105	No protein	-	lncRNA	-	-
ENST00000751584.1	LINC00847-239	1032	No protein	-	lncRNA	-	-
ENST00000751572.1	LINC00847-227	812	No protein	-	lncRNA	-	-
ENST00000751579.1	LINC00847-234	805	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000751580.1	LINC00847-235	799	No protein	-	lncRNA	-	-
ENST00000751574.1	LINC00847-229	743	No protein	-	lncRNA	-	-
ENST00000751576.1	LINC00847-231	712	No protein	-	lncRNA	-	-
ENST00000751578.1	LINC00847-233	698	No protein	-	lncRNA	-	-
ENST00000751581.1	LINC00847-236	689	No protein	-	lncRNA	-	-
ENST00000751575.1	LINC00847-230	675	No protein	-	lncRNA	-	-
ENST00000751570.1	LINC00847-225	610	No protein	-	lncRNA	-	-
ENST00000751571.1	LINC00847-226	514	No protein	-	lncRNA	-	-
ENST00000751577.1	LINC00847-232	391	No protein	-	lncRNA	-	-
ENST00000751582.1	LINC00847-237	354	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,365 bps,

Version

ENST00000653584.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000653584.1 LINC00847-209

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Transcript: ENST00000653584.1 LINC00847-209

Summary

About Us

Get help

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