Transcript: ENST00000653531.1 MIATNB-214

Description

MIAT neighbor [Source:HGNC Symbol;Acc:HGNC:50731]

Location

Chromosome 22: 26,858,668-26,870,212 forward strand.

About this transcript

This transcript has 3 exons and maps to 72 oligo probes.

Gene

This transcript is a product of gene ENSG00000244625.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000450963.6	MIATNB-212	2204	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000434868.1	MIATNB-203	6043	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000716994.1	MIATNB-225	3284	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716996.1	MIATNB-227	3192	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717180.1	MIATNB-318	2772	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668496.1	MIATNB-221	2578	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717133.1	MIATNB-293	2473	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653531.1	MIATNB-214	2395	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716998.1	MIATNB-229	2033	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717120.1	MIATNB-286	2019	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717165.1	MIATNB-309	1907	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716997.1	MIATNB-228	1873	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717155.1	MIATNB-307	1840	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446336.2	MIATNB-209	1786	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000664301.1	MIATNB-220	1779	No protein	-	lncRNA	-	-
ENST00000717125.1	MIATNB-287	1764	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671424.1	MIATNB-224	1697	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717167.1	MIATNB-311	1688	No protein	-	lncRNA	-	-
ENST00000717173.1	MIATNB-316	1620	No protein	-	lncRNA	-	-
ENST00000651474.2	MIATNB-213	1614	No protein	-	lncRNA	-	-
ENST00000717113.1	MIATNB-279	1573	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717153.1	MIATNB-305	1573	No protein	-	lncRNA	-	-
ENST00000717172.1	MIATNB-315	1497	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670559.1	MIATNB-223	1484	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664041.1	MIATNB-218	1483	No protein	-	lncRNA	-	-
ENST00000669899.1	MIATNB-222	1465	No protein	-	lncRNA	-	-
ENST00000417083.2	MIATNB-201	1462	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000717074.1	MIATNB-259	1402	No protein	-	lncRNA	-	-
ENST00000717119.1	MIATNB-285	1382	No protein	-	lncRNA	-	-
ENST00000850667.1	MIATNB-321	1382	No protein	-	lncRNA	-	-
ENST00000449017.6	MIATNB-211	1376	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000717151.1	MIATNB-303	1360	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717104.1	MIATNB-271	1326	No protein	-	lncRNA	-	-
ENST00000717152.1	MIATNB-304	1314	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717128.1	MIATNB-290	1305	No protein	-	lncRNA	-	-
ENST00000717134.1	MIATNB-294	1303	No protein	-	lncRNA	-	-
ENST00000658323.1	MIATNB-216	1269	No protein	-	lncRNA	-	-
ENST00000717166.1	MIATNB-310	1266	No protein	-	lncRNA	-	-
ENST00000717025.1	MIATNB-235	1253	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717075.1	MIATNB-260	1247	No protein	-	lncRNA	-	-
ENST00000717130.1	MIATNB-292	1227	No protein	-	lncRNA	-	-
ENST00000717169.1	MIATNB-313	1220	No protein	-	lncRNA	-	-
ENST00000717091.1	MIATNB-264	1215	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717073.1	MIATNB-258	1211	No protein	-	lncRNA	-	-
ENST00000717102.1	MIATNB-269	1206	No protein	-	lncRNA	-	-
ENST00000717068.1	MIATNB-253	1198	No protein	-	lncRNA	-	-
ENST00000664057.1	MIATNB-219	1181	No protein	-	lncRNA	-	-
ENST00000717072.1	MIATNB-257	1180	No protein	-	lncRNA	-	-
ENST00000717145.1	MIATNB-297	1177	No protein	-	lncRNA	-	-
ENST00000716995.1	MIATNB-226	1162	No protein	-	lncRNA	-	-
ENST00000717135.1	MIATNB-295	1153	No protein	-	lncRNA	-	-
ENST00000717127.1	MIATNB-289	1146	No protein	-	lncRNA	-	-
ENST00000717103.1	MIATNB-270	1118	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717148.1	MIATNB-300	1105	No protein	-	lncRNA	-	-
ENST00000717149.1	MIATNB-301	1092	No protein	-	lncRNA	-	-
ENST00000717045.1	MIATNB-252	1046	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717020.1	MIATNB-231	1046	No protein	-	lncRNA	-	-
ENST00000717071.1	MIATNB-256	1040	No protein	-	lncRNA	-	-
ENST00000717136.1	MIATNB-296	1033	No protein	-	lncRNA	-	-
ENST00000717036.1	MIATNB-244	1032	No protein	-	lncRNA	-	-
ENST00000437071.5	MIATNB-205	1006	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000717110.1	MIATNB-276	1005	No protein	-	lncRNA	-	-
ENST00000717112.1	MIATNB-278	1003	No protein	-	lncRNA	-	-
ENST00000717107.1	MIATNB-274	998	No protein	-	lncRNA	-	-
ENST00000717118.1	MIATNB-284	984	No protein	-	lncRNA	-	-
ENST00000717147.1	MIATNB-299	979	No protein	-	lncRNA	-	-
ENST00000447149.6	MIATNB-210	975	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000717021.1	MIATNB-232	968	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717115.1	MIATNB-281	967	No protein	-	lncRNA	-	-
ENST00000717019.1	MIATNB-230	957	No protein	-	lncRNA	-	-
ENST00000717129.1	MIATNB-291	954	No protein	-	lncRNA	-	-
ENST00000717164.1	MIATNB-308	941	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717174.1	MIATNB-317	941	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717069.1	MIATNB-254	940	No protein	-	lncRNA	-	-
ENST00000444388.5	MIATNB-208	918	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000717044.1	MIATNB-251	908	No protein	-	lncRNA	-	-
ENST00000717032.1	MIATNB-240	904	No protein	-	lncRNA	-	-
ENST00000717109.1	MIATNB-275	896	No protein	-	lncRNA	-	-
ENST00000717040.1	MIATNB-248	863	No protein	-	lncRNA	-	-
ENST00000717126.1	MIATNB-288	851	No protein	-	lncRNA	-	-
ENST00000438113.2	MIATNB-206	841	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000717213.1	MIATNB-319	832	No protein	-	lncRNA	-	-
ENST00000717092.1	MIATNB-265	800	No protein	-	lncRNA	-	-
ENST00000717106.1	MIATNB-273	786	No protein	-	lncRNA	-	-
ENST00000717038.1	MIATNB-246	777	No protein	-	lncRNA	-	-
ENST00000717170.1	MIATNB-314	769	No protein	-	lncRNA	-	-
ENST00000717042.1	MIATNB-250	762	No protein	-	lncRNA	-	-
ENST00000717117.1	MIATNB-283	761	No protein	-	lncRNA	-	-
ENST00000435162.5	MIATNB-204	760	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000717023.1	MIATNB-233	745	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717037.1	MIATNB-245	728	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717111.1	MIATNB-277	723	No protein	-	lncRNA	-	-
ENST00000717105.1	MIATNB-272	716	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717027.1	MIATNB-237	709	No protein	-	lncRNA	-	-
ENST00000717024.1	MIATNB-234	706	No protein	-	lncRNA	-	-
ENST00000717033.1	MIATNB-241	701	No protein	-	lncRNA	-	-
ENST00000717114.1	MIATNB-280	689	No protein	-	lncRNA	-	-
ENST00000717076.1	MIATNB-261	685	No protein	-	lncRNA	-	-
ENST00000717026.1	MIATNB-236	677	No protein	-	lncRNA	-	-
ENST00000653953.1	MIATNB-215	664	No protein	-	lncRNA	-	-
ENST00000717214.1	MIATNB-320	662	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717077.1	MIATNB-262	653	No protein	-	lncRNA	-	-
ENST00000717070.1	MIATNB-255	638	No protein	-	lncRNA	-	-
ENST00000717034.1	MIATNB-242	615	No protein	-	lncRNA	-	-
ENST00000717039.1	MIATNB-247	613	No protein	-	lncRNA	-	-
ENST00000717029.1	MIATNB-239	609	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717146.1	MIATNB-298	598	No protein	-	lncRNA	-	-
ENST00000421253.1	MIATNB-202	592	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000440816.5	MIATNB-207	591	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000717041.1	MIATNB-249	580	No protein	-	lncRNA	-	-
ENST00000717028.1	MIATNB-238	563	No protein	-	lncRNA	-	-
ENST00000717094.1	MIATNB-267	529	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717116.1	MIATNB-282	527	No protein	-	lncRNA	-	-
ENST00000717095.1	MIATNB-268	497	No protein	-	lncRNA	-	-
ENST00000717078.1	MIATNB-263	484	No protein	-	lncRNA	-	-
ENST00000717093.1	MIATNB-266	470	No protein	-	lncRNA	-	-
ENST00000717150.1	MIATNB-302	460	No protein	-	lncRNA	-	-
ENST00000717154.1	MIATNB-306	443	No protein	-	lncRNA	-	-
ENST00000717035.1	MIATNB-243	430	No protein	-	lncRNA	-	-
ENST00000717168.1	MIATNB-312	273	No protein	-	lncRNA	-	-
ENST00000662474.1	MIATNB-217	250	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,395 bps,

Version

ENST00000653531.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000653531.1 MIATNB-214

Summary

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Transcript: ENST00000653531.1 MIATNB-214

Summary

About Us

Get help

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