Transcript: ENST00000653517.4 LINC01159-205

Description

long intergenic non-protein coding RNA 1159 [Source:HGNC Symbol;Acc:HGNC:49514]

Gene Synonyms

LINC-BRN1B

Location

Chromosome 2: 104,869,220-104,872,648 reverse strand.

About this transcript

This transcript has 3 exons and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSG00000229743.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000734122.1	LINC01159-212	574	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000433433.1	LINC01159-201	3103	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000734133.1	LINC01159-223	1845	No protein	-	lncRNA	-	-
ENST00000692191.2	LINC01159-210	1579	No protein	-	lncRNA	-	-
ENST00000691292.2	LINC01159-209	1338	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734132.1	LINC01159-222	1324	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000686170.2	LINC01159-206	1303	No protein	-	lncRNA	-	-
ENST00000734136.1	LINC01159-226	1151	No protein	-	lncRNA	-	-
ENST00000701008.2	LINC01159-211	1091	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653517.4	LINC01159-205	1019	No protein	-	lncRNA	-	-
ENST00000734144.1	LINC01159-234	993	No protein	-	lncRNA	-	-
ENST00000734137.1	LINC01159-227	883	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000651283.2	LINC01159-204	873	No protein	-	lncRNA	-	-
ENST00000734130.1	LINC01159-220	860	No protein	-	lncRNA	-	-
ENST00000734139.1	LINC01159-229	858	No protein	-	lncRNA	-	-
ENST00000734134.1	LINC01159-224	852	No protein	-	lncRNA	-	-
ENST00000734131.1	LINC01159-221	835	No protein	-	lncRNA	-	-
ENST00000734148.1	LINC01159-238	790	No protein	-	lncRNA	-	-
ENST00000686982.3	LINC01159-207	781	No protein	-	lncRNA	-	-
ENST00000434764.3	LINC01159-202	765	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000734124.1	LINC01159-214	702	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734145.1	LINC01159-235	697	No protein	-	lncRNA	-	-
ENST00000734138.1	LINC01159-228	690	No protein	-	lncRNA	-	-
ENST00000734128.1	LINC01159-218	681	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734127.1	LINC01159-217	668	No protein	-	lncRNA	-	-
ENST00000734146.1	LINC01159-236	639	No protein	-	lncRNA	-	-
ENST00000734125.1	LINC01159-215	622	No protein	-	lncRNA	-	-
ENST00000734129.1	LINC01159-219	621	No protein	-	lncRNA	-	-
ENST00000734141.1	LINC01159-231	621	No protein	-	lncRNA	-	-
ENST00000734151.1	LINC01159-241	609	No protein	-	lncRNA	-	-
ENST00000734143.1	LINC01159-233	608	No protein	-	lncRNA	-	-
ENST00000734147.1	LINC01159-237	601	No protein	-	lncRNA	-	-
ENST00000734123.1	LINC01159-213	587	No protein	-	lncRNA	-	-
ENST00000734126.1	LINC01159-216	580	No protein	-	lncRNA	-	-
ENST00000734149.1	LINC01159-239	576	No protein	-	lncRNA	-	-
ENST00000734135.1	LINC01159-225	573	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734140.1	LINC01159-230	554	No protein	-	lncRNA	-	-
ENST00000689274.2	LINC01159-208	542	No protein	-	lncRNA	-	-
ENST00000734142.1	LINC01159-232	536	No protein	-	lncRNA	-	-
ENST00000734150.1	LINC01159-240	502	No protein	-	lncRNA	-	-
ENST00000454183.2	LINC01159-203	457	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,019 bps,

Version

ENST00000653517.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000653517.4 LINC01159-205

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Transcript: ENST00000653517.4 LINC01159-205

Summary

About Us

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