Transcript: ENST00000653020.1 LINC02492-205

Description

long intergenic non-protein coding RNA 2492 [Source:HGNC Symbol;Acc:HGNC:53476]

Location

Chromosome 4: 187,532,878-187,646,367 reverse strand.

About this transcript

This transcript has 8 exons and maps to 473 oligo probes.

Gene

This transcript is a product of gene ENSG00000250590.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000507817.3	LINC02492-202	600	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000669092.1	LINC02492-220	1619	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653020.1	LINC02492-205	1408	No protein	-	lncRNA	-	-
ENST00000668469.1	LINC02492-219	1338	No protein	-	lncRNA	-	-
ENST00000657902.1	LINC02492-210	1298	No protein	-	lncRNA	-	-
ENST00000654776.2	LINC02492-207	1246	No protein	-	lncRNA	-	-
ENST00000658590.1	LINC02492-211	1242	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654552.1	LINC02492-206	1221	No protein	-	lncRNA	-	-
ENST00000667027.1	LINC02492-216	1208	No protein	-	lncRNA	-	-
ENST00000667508.2	LINC02492-217	1165	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659431.1	LINC02492-212	1139	No protein	-	lncRNA	-	-
ENST00000664977.1	LINC02492-214	1099	No protein	-	lncRNA	-	-
ENST00000665640.1	LINC02492-215	1096	No protein	-	lncRNA	-	-
ENST00000515660.6	LINC02492-204	1035	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000735981.1	LINC02492-233	1027	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656759.1	LINC02492-209	1007	No protein	-	lncRNA	-	-
ENST00000663188.1	LINC02492-213	993	No protein	-	lncRNA	-	-
ENST00000667648.1	LINC02492-218	940	No protein	-	lncRNA	-	-
ENST00000735971.1	LINC02492-223	913	No protein	-	lncRNA	-	-
ENST00000735983.1	LINC02492-235	896	No protein	-	lncRNA	-	-
ENST00000735980.1	LINC02492-232	859	No protein	-	lncRNA	-	-
ENST00000514767.2	LINC02492-203	849	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000735982.1	LINC02492-234	836	No protein	-	lncRNA	-	-
ENST00000735972.1	LINC02492-224	805	No protein	-	lncRNA	-	-
ENST00000735979.1	LINC02492-231	751	No protein	-	lncRNA	-	-
ENST00000656713.1	LINC02492-208	733	No protein	-	lncRNA	-	-
ENST00000735973.1	LINC02492-225	721	No protein	-	lncRNA	-	-
ENST00000735975.1	LINC02492-227	638	No protein	-	lncRNA	-	-
ENST00000735976.1	LINC02492-228	602	No protein	-	lncRNA	-	-
ENST00000735970.1	LINC02492-222	594	No protein	-	lncRNA	-	-
ENST00000735974.1	LINC02492-226	570	No protein	-	lncRNA	-	-
ENST00000502952.1	LINC02492-201	564	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000735969.1	LINC02492-221	496	No protein	-	lncRNA	-	-
ENST00000735978.1	LINC02492-230	455	No protein	-	lncRNA	-	-
ENST00000735977.1	LINC02492-229	312	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,408 bps,

Version

ENST00000653020.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000653020.1 LINC02492-205

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Transcript: ENST00000653020.1 LINC02492-205

Summary

About Us

Get help

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