Transcript: ENST00000652536.2 PREP-203

Description

prolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]

Location

Chromosome 6: 105,273,218-105,403,082 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 16 domains and features, is associated with 53444 variant alleles and maps to 654 oligo probes.

Gene

This transcript is a product of gene ENSG00000085377.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000652536.2	PREP-203	7250	710aa	ENSP00000499089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5053	P48147	NM_002726.5	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000369110.8	PREP-201	3772	644aa	ENSP00000358106.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A499FJL1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000448705.1	PREP-202	961	45aa	ENSP00000401796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y5Y0	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 7,250 bps, Translation length: 710 residues

MANE

This MANE Select transcript contains ENSP00000499089 and matches to NM_002726.5 and NP_002717.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48147

CCDS

This transcript is a member of the Human CCDS set: CCDS5053

Version

ENST00000652536.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000652536.2 PREP-203

Summary

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Transcript: ENST00000652536.2 PREP-203

Summary

About Us

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