Transcript: ENST00000651478.1 ARLNC1-223

Description

androgen receptor regulated long noncoding RNA 1 [Source:HGNC Symbol;Acc:HGNC:53032]

Gene Synonyms

LINC02170, PRCAT47

Location

Chromosome 16: 80,829,806-80,845,723 reverse strand.

About this transcript

This transcript has 4 exons and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSG00000260896.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000562231.6	ARLNC1-202	2305	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000652422.1	ARLNC1-246	2756	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652701.1	ARLNC1-253	2385	No protein	-	lncRNA	-	-
ENST00000651582.1	ARLNC1-225	2364	No protein	-	lncRNA	-	-
ENST00000652149.1	ARLNC1-239	2323	No protein	-	lncRNA	-	-
ENST00000651276.1	ARLNC1-219	2283	No protein	-	lncRNA	-	-
ENST00000650926.1	ARLNC1-208	2219	No protein	-	lncRNA	-	-
ENST00000651724.1	ARLNC1-230	2069	No protein	-	lncRNA	-	-
ENST00000651980.1	ARLNC1-235	1594	No protein	-	lncRNA	-	-
ENST00000651118.1	ARLNC1-215	1543	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652662.1	ARLNC1-251	1529	No protein	-	lncRNA	-	-
ENST00000651739.1	ARLNC1-232	1511	No protein	-	lncRNA	-	-
ENST00000652538.1	ARLNC1-249	1486	No protein	-	lncRNA	-	-
ENST00000651120.1	ARLNC1-217	1448	No protein	-	lncRNA	-	-
ENST00000652646.1	ARLNC1-250	1432	No protein	-	lncRNA	-	-
ENST00000650965.1	ARLNC1-210	1388	No protein	-	lncRNA	-	-
ENST00000652020.1	ARLNC1-236	1383	No protein	-	lncRNA	-	-
ENST00000650974.1	ARLNC1-211	1372	No protein	-	lncRNA	-	-
ENST00000651617.1	ARLNC1-227	1372	No protein	-	lncRNA	-	-
ENST00000652275.1	ARLNC1-243	1360	No protein	-	lncRNA	-	-
ENST00000651313.1	ARLNC1-220	1330	No protein	-	lncRNA	-	-
ENST00000650729.1	ARLNC1-207	1312	No protein	-	lncRNA	-	-
ENST00000651082.1	ARLNC1-214	1306	No protein	-	lncRNA	-	-
ENST00000652211.1	ARLNC1-242	1303	No protein	-	lncRNA	-	-
ENST00000651153.1	ARLNC1-218	1240	No protein	-	lncRNA	-	-
ENST00000651119.1	ARLNC1-216	1238	No protein	-	lncRNA	-	-
ENST00000651389.1	ARLNC1-221	1237	No protein	-	lncRNA	-	-
ENST00000652512.1	ARLNC1-248	1236	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000650994.1	ARLNC1-212	1232	No protein	-	lncRNA	-	-
ENST00000652187.1	ARLNC1-240	1221	No protein	-	lncRNA	-	-
ENST00000651478.1	ARLNC1-223	1217	No protein	-	lncRNA	-	-
ENST00000651859.1	ARLNC1-234	1197	No protein	-	lncRNA	-	-
ENST00000650943.1	ARLNC1-209	1193	No protein	-	lncRNA	-	-
ENST00000650680.1	ARLNC1-206	1192	No protein	-	lncRNA	-	-
ENST00000650661.1	ARLNC1-205	1182	No protein	-	lncRNA	-	-
ENST00000652403.1	ARLNC1-245	1173	No protein	-	lncRNA	-	-
ENST00000651072.1	ARLNC1-213	1153	No protein	-	lncRNA	-	-
ENST00000652077.1	ARLNC1-237	1139	No protein	-	lncRNA	-	-
ENST00000652507.1	ARLNC1-247	1120	No protein	-	lncRNA	-	-
ENST00000651730.1	ARLNC1-231	1100	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652137.1	ARLNC1-238	1098	No protein	-	lncRNA	-	-
ENST00000652668.1	ARLNC1-252	1067	No protein	-	lncRNA	-	-
ENST00000651640.1	ARLNC1-229	1046	No protein	-	lncRNA	-	-
ENST00000651594.1	ARLNC1-226	1000	No protein	-	lncRNA	-	-
ENST00000652198.1	ARLNC1-241	990	No protein	-	lncRNA	-	-
ENST00000651780.1	ARLNC1-233	978	No protein	-	lncRNA	-	-
ENST00000651521.1	ARLNC1-224	855	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652349.1	ARLNC1-244	845	No protein	-	lncRNA	-	-
ENST00000561519.5	ARLNC1-201	555	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000651473.1	ARLNC1-222	529	No protein	-	lncRNA	-	-
ENST00000563626.1	ARLNC1-203	501	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000651631.1	ARLNC1-228	489	No protein	-	lncRNA	-	-
ENST00000569356.1	ARLNC1-204	465	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000807040.1	ARLNC1-254	376	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,217 bps,

Version

ENST00000651478.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENST00000651478.1 ARLNC1-223

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Transcript: ENST00000651478.1 ARLNC1-223

Summary

About Us

Get help

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