Transcript: ENST00000651050.1 LINC01667-205

Description

long intergenic non-protein coding RNA 1667 [Source:NCBI gene (formerly Entrezgene);Acc:441058]

Location

Chromosome 21: 9,809,216-9,838,011 reverse strand.

About this transcript

This transcript has 2 exons and maps to 164 oligo probes.

Gene

This transcript is a product of gene ENSG00000293035.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000786008.1	LINC01667-207	837	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000623933.2	LINC01667-204	2320	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000786047.1	LINC01667-246	1656	No protein	-	lncRNA	-	-
ENST00000786065.1	LINC01667-264	1642	No protein	-	lncRNA	-	-
ENST00000786044.1	LINC01667-243	1612	No protein	-	lncRNA	-	-
ENST00000786051.1	LINC01667-250	1612	No protein	-	lncRNA	-	-
ENST00000786053.1	LINC01667-252	1566	No protein	-	lncRNA	-	-
ENST00000651050.1	LINC01667-205	1548	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786059.1	LINC01667-258	1513	No protein	-	lncRNA	-	-
ENST00000786063.1	LINC01667-262	1504	No protein	-	lncRNA	-	-
ENST00000786043.1	LINC01667-242	1496	No protein	-	lncRNA	-	-
ENST00000786013.1	LINC01667-212	1492	No protein	-	lncRNA	-	-
ENST00000786057.1	LINC01667-256	1478	No protein	-	lncRNA	-	-
ENST00000786050.1	LINC01667-249	1474	No protein	-	lncRNA	-	-
ENST00000786061.1	LINC01667-260	1463	No protein	-	lncRNA	-	-
ENST00000786058.1	LINC01667-257	1461	No protein	-	lncRNA	-	-
ENST00000786060.1	LINC01667-259	1459	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786041.1	LINC01667-240	1458	No protein	-	lncRNA	-	-
ENST00000786049.1	LINC01667-248	1445	No protein	-	lncRNA	-	-
ENST00000623919.1	LINC01667-203	1422	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000651542.1	LINC01667-206	1386	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786048.1	LINC01667-247	1351	No protein	-	lncRNA	-	-
ENST00000786014.1	LINC01667-213	1283	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786019.1	LINC01667-218	1157	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000623554.3	LINC01667-202	1137	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000786031.1	LINC01667-230	1135	No protein	-	lncRNA	-	-
ENST00000786029.1	LINC01667-228	1116	No protein	-	lncRNA	-	-
ENST00000786025.1	LINC01667-224	1049	No protein	-	lncRNA	-	-
ENST00000786018.1	LINC01667-217	975	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786032.1	LINC01667-231	874	No protein	-	lncRNA	-	-
ENST00000786020.1	LINC01667-219	866	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786056.1	LINC01667-255	864	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786028.1	LINC01667-227	839	No protein	-	lncRNA	-	-
ENST00000786011.1	LINC01667-210	835	No protein	-	lncRNA	-	-
ENST00000786024.1	LINC01667-223	828	No protein	-	lncRNA	-	-
ENST00000786026.1	LINC01667-225	825	No protein	-	lncRNA	-	-
ENST00000786022.1	LINC01667-221	811	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786037.1	LINC01667-236	804	No protein	-	lncRNA	-	-
ENST00000786038.1	LINC01667-237	790	No protein	-	lncRNA	-	-
ENST00000786023.1	LINC01667-222	728	No protein	-	lncRNA	-	-
ENST00000786045.1	LINC01667-244	727	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786052.1	LINC01667-251	724	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786017.1	LINC01667-216	714	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786030.1	LINC01667-229	678	No protein	-	lncRNA	-	-
ENST00000786040.1	LINC01667-239	662	No protein	-	lncRNA	-	-
ENST00000786034.1	LINC01667-233	656	No protein	-	lncRNA	-	-
ENST00000786021.1	LINC01667-220	650	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786009.1	LINC01667-208	645	No protein	-	lncRNA	-	-
ENST00000786027.1	LINC01667-226	641	No protein	-	lncRNA	-	-
ENST00000786033.1	LINC01667-232	641	No protein	-	lncRNA	-	-
ENST00000786036.1	LINC01667-235	641	No protein	-	lncRNA	-	-
ENST00000786012.1	LINC01667-211	633	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786042.1	LINC01667-241	627	No protein	-	lncRNA	-	-
ENST00000786046.1	LINC01667-245	575	No protein	-	lncRNA	-	-
ENST00000786054.1	LINC01667-253	575	No protein	-	lncRNA	-	-
ENST00000786035.1	LINC01667-234	565	No protein	-	lncRNA	-	-
ENST00000786039.1	LINC01667-238	514	No protein	-	lncRNA	-	-
ENST00000786016.1	LINC01667-215	473	No protein	-	lncRNA	-	-
ENST00000786062.1	LINC01667-261	464	No protein	-	lncRNA	-	-
ENST00000786010.1	LINC01667-209	449	No protein	-	lncRNA	-	-
ENST00000786064.1	LINC01667-263	385	No protein	-	lncRNA	-	-
ENST00000786066.1	LINC01667-265	371	No protein	-	lncRNA	-	-
ENST00000786055.1	LINC01667-254	366	No protein	-	lncRNA	-	-
ENST00000786015.1	LINC01667-214	360	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,548 bps,

Version

ENST00000651050.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000651050.1 LINC01667-205

Summary

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Transcript: ENST00000651050.1 LINC01667-205

Summary

About Us

Get help

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