Transcript: ENST00000650412.1 LINP1-216

Description

lncRNA in non-homologous end joining pathway 1 [Source:HGNC Symbol;Acc:HGNC:53170]

Gene Synonyms

PARROT

Location

Chromosome 10: 6,779,588-6,834,510 forward strand.

About this transcript

This transcript has 3 exons and maps to 90 oligo probes.

Gene

This transcript is a product of gene ENSG00000223784.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000650342.1	LINP1-215	1154	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000436383.3	LINP1-202	3135	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000650314.1	LINP1-213	3105	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000650334.1	LINP1-214	2529	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000648637.2	LINP1-205	2123	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000649087.2	LINP1-208	2098	No protein	-	lncRNA	-	-
ENST00000829840.1	LINP1-235	1949	No protein	-	lncRNA	-	-
ENST00000649029.1	LINP1-207	1647	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000648398.1	LINP1-204	1639	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000649110.1	LINP1-209	1377	No protein	-	lncRNA	-	-
ENST00000650412.1	LINP1-216	1351	No protein	-	lncRNA	-	-
ENST00000829833.1	LINP1-228	1344	No protein	-	lncRNA	-	-
ENST00000648093.1	LINP1-203	1296	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000649511.1	LINP1-210	1290	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000417112.2	LINP1-201	1243	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000650205.1	LINP1-212	1231	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829832.1	LINP1-227	1165	No protein	-	lncRNA	-	-
ENST00000648995.2	LINP1-206	1137	No protein	-	lncRNA	-	-
ENST00000829824.1	LINP1-219	1019	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829822.1	LINP1-217	1012	No protein	-	lncRNA	-	-
ENST00000829843.1	LINP1-238	932	No protein	-	lncRNA	-	-
ENST00000829835.1	LINP1-230	907	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829823.1	LINP1-218	845	No protein	-	lncRNA	-	-
ENST00000829828.1	LINP1-223	844	No protein	-	lncRNA	-	-
ENST00000829844.1	LINP1-239	844	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000649625.1	LINP1-211	810	No protein	-	lncRNA	-	-
ENST00000829841.1	LINP1-236	761	No protein	-	lncRNA	-	-
ENST00000829837.1	LINP1-232	681	No protein	-	lncRNA	-	-
ENST00000829829.1	LINP1-224	673	No protein	-	lncRNA	-	-
ENST00000829827.1	LINP1-222	655	No protein	-	lncRNA	-	-
ENST00000829830.1	LINP1-225	648	No protein	-	lncRNA	-	-
ENST00000829839.1	LINP1-234	602	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829842.1	LINP1-237	592	No protein	-	lncRNA	-	-
ENST00000829838.1	LINP1-233	576	No protein	-	lncRNA	-	-
ENST00000829825.1	LINP1-220	511	No protein	-	lncRNA	-	-
ENST00000829836.1	LINP1-231	508	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829831.1	LINP1-226	479	No protein	-	lncRNA	-	-
ENST00000829834.1	LINP1-229	460	No protein	-	lncRNA	-	-
ENST00000829826.1	LINP1-221	430	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,351 bps,

Version

ENST00000650412.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENST00000650412.1 LINP1-216

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000650412.1 LINP1-216

Summary

About Us

Get help

Our sister sites

Follow us