Transcript: ENST00000650277.2 LCE7A-201

Description

late cornified envelope 7A [Source:HGNC Symbol;Acc:HGNC:55921]

Location

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 563 variant alleles and maps to 5 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000650277.2	LCE7A-201	612	95aa	ENSP00000497579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS91055	A0A3B3IT34 P0DV60	NM_001395990.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 612 bps, Translation length: 95 residues

MANE

This MANE Select transcript contains ENSP00000497579 and matches to NM_001395990.1 and NP_001382919.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0DV60

CCDS

This transcript is a member of the Human CCDS set: CCDS91055

Version

ENST00000650277.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.