Transcript: ENST00000647983.1 LGALSL-DT-202

Description

LGALSL divergent transcript [Source:HGNC Symbol;Acc:HGNC:53951]

Gene Synonyms

LOC105374771

Location

Chromosome 2: 64,395,516-64,453,897 reverse strand.

About this transcript

This transcript has 4 exons and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSG00000223935.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000811778.1	LGALSL-DT-204	321	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000669208.2	LGALSL-DT-203	2644	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000811782.1	LGALSL-DT-208	1136	No protein	-	lncRNA	-	-
ENST00000811780.1	LGALSL-DT-206	1110	No protein	-	lncRNA	-	-
ENST00000811787.1	LGALSL-DT-213	945	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000811779.1	LGALSL-DT-205	900	No protein	-	lncRNA	-	-
ENST00000811788.1	LGALSL-DT-214	759	No protein	-	lncRNA	-	-
ENST00000441630.1	LGALSL-DT-201	723	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000811781.1	LGALSL-DT-207	670	No protein	-	lncRNA	-	-
ENST00000811784.1	LGALSL-DT-210	650	No protein	-	lncRNA	-	-
ENST00000811785.1	LGALSL-DT-211	603	No protein	-	lncRNA	-	-
ENST00000647983.1	LGALSL-DT-202	527	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000811786.1	LGALSL-DT-212	462	No protein	-	lncRNA	-	-
ENST00000811783.1	LGALSL-DT-209	453	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 527 bps,

Version

ENST00000647983.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000647983.1 LGALSL-DT-202

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Transcript: ENST00000647983.1 LGALSL-DT-202

Summary

About Us

Get help

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