Transcript: ENST00000647943.2 LINC02646-202

Description

long intergenic non-protein coding RNA 2646 [Source:HGNC Symbol;Acc:HGNC:54130]

Location

Chromosome 10: 130,213,488-130,216,401 forward strand.

About this transcript

This transcript has 2 exons and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSG00000236303.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000648275.1	LINC02646-203	816	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000739876.1	LINC02646-209	1587	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000739872.1	LINC02646-205	1517	No protein	-	lncRNA	-	-
ENST00000739880.1	LINC02646-213	1451	No protein	-	lncRNA	-	-
ENST00000739878.1	LINC02646-211	1276	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000739877.1	LINC02646-210	1226	No protein	-	lncRNA	-	-
ENST00000739873.1	LINC02646-206	1185	No protein	-	lncRNA	-	-
ENST00000739874.1	LINC02646-207	1183	No protein	-	lncRNA	-	-
ENST00000739875.1	LINC02646-208	1182	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000739879.1	LINC02646-212	1027	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000647943.2	LINC02646-202	962	No protein	-	lncRNA	-	-
ENST00000657871.1	LINC02646-204	865	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000792598.1	LINC02646-218	738	No protein	-	lncRNA	-	-
ENST00000792595.1	LINC02646-215	722	No protein	-	lncRNA	-	-
ENST00000792594.1	LINC02646-214	642	No protein	-	lncRNA	-	-
ENST00000792597.1	LINC02646-217	565	No protein	-	lncRNA	-	-
ENST00000792596.1	LINC02646-216	502	No protein	-	lncRNA	-	-
ENST00000792599.1	LINC02646-219	432	No protein	-	lncRNA	-	-
ENST00000439421.2	LINC02646-201	297	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 962 bps,

Version

ENST00000647943.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000647943.2 LINC02646-202

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Transcript: ENST00000647943.2 LINC02646-202

Summary

About Us

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