Human (GRCh38.p14)
Description

hepatocellular carcinoma up-regulated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:34232]

Gene Synonyms

HCCAT1, LINC00078, NCRNA00078

Location
About this transcript

This transcript has 8 exons and maps to 229 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000503668.3HULC-202434No protein-
 
lncRNA
NR_004855.3MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicTSL:1
ENST00000642357.1HULC-2073568No protein-
 
lncRNA
-GENCODE Basic
ENST00000644837.1HULC-2553529No protein-
 
lncRNA
-GENCODE Basic
ENST00000646231.1HULC-2843469No protein-
 
lncRNA
-GENCODE Basic
ENST00000643788.1HULC-2363387No protein-
 
lncRNA
-GENCODE Basic
ENST00000645474.1HULC-2663341No protein-
 
lncRNA
--
ENST00000643985.1HULC-2413302No protein-
 
lncRNA
-GENCODE Basic
ENST00000645379.1HULC-2643277No protein-
 
lncRNA
-GENCODE Basic
ENST00000646996.1HULC-3053163No protein-
 
lncRNA
-GENCODE Basic
ENST00000643058.1HULC-2183147No protein-
 
lncRNA
-GENCODE Basic
ENST00000643136.1HULC-2213133No protein-
 
lncRNA
-GENCODE Basic
ENST00000643126.1HULC-2203014No protein-
 
lncRNA
-GENCODE Basic
ENST00000643036.1HULC-2172976No protein-
 
lncRNA
--
ENST00000645365.1HULC-2632976No protein-
 
lncRNA
-GENCODE Basic
ENST00000642163.1HULC-2032936No protein-
 
lncRNA
-GENCODE Basic
ENST00000646490.1HULC-2922925No protein-
 
lncRNA
-GENCODE Basic
ENST00000645344.1HULC-2622883No protein-
 
lncRNA
-GENCODE Basic
ENST00000646431.1HULC-2902882No protein-
 
lncRNA
-GENCODE Basic
ENST00000645486.2HULC-2672851No protein-
 
lncRNA
-GENCODE Basic
ENST00000647365.1HULC-3122851No protein-
 
lncRNA
--
ENST00000645047.1HULC-2582843No protein-
 
lncRNA
--
ENST00000645808.1HULC-2742836No protein-
 
lncRNA
-GENCODE Basic
ENST00000644654.1HULC-2522821No protein-
 
lncRNA
--
ENST00000645464.1HULC-2652806No protein-
 
lncRNA
--
ENST00000645976.1HULC-2802805No protein-
 
lncRNA
--
ENST00000643545.1HULC-2322777No protein-
 
lncRNA
--
ENST00000646295.2HULC-2862660No protein-
 
lncRNA
--
ENST00000646792.1HULC-3012638No protein-
 
lncRNA
--
ENST00000646718.1HULC-2952611No protein-
 
lncRNA
--
ENST00000644248.1HULC-2462604No protein-
 
lncRNA
--
ENST00000645611.1HULC-2682563No protein-
 
lncRNA
--
ENST00000643473.1HULC-2302543No protein-
 
lncRNA
--
ENST00000646007.1HULC-2812528No protein-
 
lncRNA
-GENCODE Basic
ENST00000644778.1HULC-2532466No protein-
 
lncRNA
--
ENST00000642534.1HULC-2092463No protein-
 
lncRNA
--
ENST00000646521.1HULC-2932415No protein-
 
lncRNA
--
ENST00000748947.1HULC-3302407No protein-
 
lncRNA
--
ENST00000646876.1HULC-3032369No protein-
 
lncRNA
--
ENST00000748945.1HULC-3282270No protein-
 
lncRNA
--
ENST00000642760.1HULC-2132257No protein-
 
lncRNA
--
ENST00000646073.1HULC-2832225No protein-
 
lncRNA
--
ENST00000647156.1HULC-3092218No protein-
 
lncRNA
-GENCODE Basic
ENST00000748970.1HULC-3532170No protein-
 
lncRNA
--
ENST00000701974.1HULC-3222160No protein-
 
lncRNA
-GENCODE Basic
ENST00000642798.1HULC-2142151No protein-
 
lncRNA
--
ENST00000748965.1HULC-3482131No protein-
 
lncRNA
--
ENST00000644363.1HULC-2472079No protein-
 
lncRNA
--
ENST00000645322.1HULC-2612060No protein-
 
lncRNA
--
ENST00000642666.3HULC-2122021No protein-
 
lncRNA
--
ENST00000790776.1HULC-4041883No protein-
 
lncRNA
--
ENST00000643311.1HULC-2251856No protein-
 
lncRNA
-GENCODE Basic
ENST00000644892.1HULC-2561844No protein-
 
lncRNA
--
ENST00000643761.1HULC-2351831No protein-
 
lncRNA
--
ENST00000644038.2HULC-2421826No protein-
 
lncRNA
--
ENST00000748977.1HULC-3601810No protein-
 
lncRNA
-GENCODE Basic
ENST00000645747.1HULC-2701783No protein-
 
lncRNA
-GENCODE Basic
ENST00000644070.1HULC-2431727No protein-
 
lncRNA
--
ENST00000645796.1HULC-2731714No protein-
 
lncRNA
--
ENST00000790766.1HULC-3941705No protein-
 
lncRNA
-GENCODE Basic
ENST00000646488.2HULC-2911699No protein-
 
lncRNA
--
ENST00000645087.1HULC-2591694No protein-
 
lncRNA
--
ENST00000748971.1HULC-3541690No protein-
 
lncRNA
--
ENST00000644213.2HULC-2451686No protein-
 
lncRNA
--
ENST00000790775.1HULC-4031672No protein-
 
lncRNA
--
ENST00000748960.1HULC-3431669No protein-
 
lncRNA
--
ENST00000790767.1HULC-3951656No protein-
 
lncRNA
--
ENST00000642859.1HULC-2151641No protein-
 
lncRNA
--
ENST00000748998.1HULC-3811640No protein-
 
lncRNA
--
ENST00000749000.1HULC-3831637No protein-
 
lncRNA
--
ENST00000702170.1HULC-3251630No protein-
 
lncRNA
-GENCODE Basic
ENST00000790777.1HULC-4051612No protein-
 
lncRNA
--
ENST00000748975.1HULC-3581612No protein-
 
lncRNA
--
ENST00000643259.1HULC-2241599No protein-
 
lncRNA
-GENCODE Basic
ENST00000645715.1HULC-2691596No protein-
 
lncRNA
--
ENST00000790762.1HULC-3911591No protein-
 
lncRNA
--
ENST00000642622.1HULC-2101569No protein-
 
lncRNA
-GENCODE Basic
ENST00000647466.1HULC-3131556No protein-
 
lncRNA
-GENCODE Basic
ENST00000643141.1HULC-2221547No protein-
 
lncRNA
-GENCODE Basic
ENST00000646706.1HULC-2941542No protein-
 
lncRNA
--
ENST00000642458.1HULC-2081528No protein-
 
lncRNA
--
ENST00000790768.1HULC-3961527No protein-
 
lncRNA
--
ENST00000748973.1HULC-3561523No protein-
 
lncRNA
--
ENST00000790765.1HULC-3931510No protein-
 
lncRNA
--
ENST00000645820.1HULC-2751505No protein-
 
lncRNA
--
ENST00000790758.1HULC-3881497No protein-
 
lncRNA
--
ENST00000643635.1HULC-2341490No protein-
 
lncRNA
--
ENST00000748972.1HULC-3551482No protein-
 
lncRNA
--
ENST00000790761.1HULC-3901478No protein-
 
lncRNA
--
ENST00000748961.1HULC-3441466No protein-
 
lncRNA
--
ENST00000643526.1HULC-2311458No protein-
 
lncRNA
--
ENST00000643571.1HULC-2331457No protein-
 
lncRNA
--
ENST00000748999.1HULC-3821434No protein-
 
lncRNA
--
ENST00000646403.1HULC-2881429No protein-
 
lncRNA
--
ENST00000702251.1HULC-3261428No protein-
 
lncRNA
--
ENST00000701034.1HULC-3181426No protein-
 
lncRNA
--
ENST00000702052.1HULC-3231424No protein-
 
lncRNA
--
ENST00000790789.1HULC-4171423No protein-
 
lncRNA
--
ENST00000643938.1HULC-2391412No protein-
 
lncRNA
--
ENST00000644364.1HULC-2481396No protein-
 
lncRNA
-GENCODE Basic
ENST00000748992.1HULC-3751381No protein-
 
lncRNA
--
ENST00000790764.1HULC-3921376No protein-
 
lncRNA
--
ENST00000748974.1HULC-3571375No protein-
 
lncRNA
--
ENST00000748976.1HULC-3591345No protein-
 
lncRNA
--
ENST00000646749.2HULC-2971341No protein-
 
lncRNA
--
ENST00000645758.1HULC-2721337No protein-
 
lncRNA
--
ENST00000701010.2HULC-3171336No protein-
 
lncRNA
--
ENST00000645940.1HULC-2781330No protein-
 
lncRNA
--
ENST00000748962.1HULC-3451319No protein-
 
lncRNA
--
ENST00000645970.1HULC-2791317No protein-
 
lncRNA
--
ENST00000748959.1HULC-3421296No protein-
 
lncRNA
--
ENST00000643404.1HULC-2261296No protein-
 
lncRNA
--
ENST00000645017.2HULC-2571291No protein-
 
lncRNA
--
ENST00000647175.1HULC-3101288No protein-
 
lncRNA
--
ENST00000645925.1HULC-2771281No protein-
 
lncRNA
--
ENST00000748958.1HULC-3411279No protein-
 
lncRNA
--
ENST00000748994.1HULC-3771278No protein-
 
lncRNA
--
ENST00000644610.1HULC-2511274No protein-
 
lncRNA
--
ENST00000642345.1HULC-2061274No protein-
 
lncRNA
--
ENST00000748995.1HULC-3781271No protein-
 
lncRNA
--
ENST00000647306.1HULC-3111269No protein-
 
lncRNA
--
ENST00000643414.1HULC-2271252No protein-
 
lncRNA
--
ENST00000644111.1HULC-2441238No protein-
 
lncRNA
-GENCODE Basic
ENST00000644441.1HULC-2491226No protein-
 
lncRNA
--
ENST00000647039.1HULC-3061218No protein-
 
lncRNA
-GENCODE Basic
ENST00000647052.1HULC-3071214No protein-
 
lncRNA
--
ENST00000643431.1HULC-2291208No protein-
 
lncRNA
--
ENST00000644800.1HULC-2541205No protein-
 
lncRNA
--
ENST00000645750.1HULC-2711204No protein-
 
lncRNA
--
ENST00000790773.1HULC-4011198No protein-
 
lncRNA
-GENCODE Basic
ENST00000647135.1HULC-3081196No protein-
 
lncRNA
--
ENST00000643415.1HULC-2281191No protein-
 
lncRNA
--
ENST00000643083.1HULC-2191184No protein-
 
lncRNA
--
ENST00000645321.1HULC-2601171No protein-
 
lncRNA
--
ENST00000646406.1HULC-2891167No protein-
 
lncRNA
--
ENST00000665267.1HULC-3141161No protein-
 
lncRNA
--
ENST00000643953.1HULC-2401150No protein-
 
lncRNA
--
ENST00000646868.1HULC-3021145No protein-
 
lncRNA
-GENCODE Basic
ENST00000646741.1HULC-2961145No protein-
 
lncRNA
--
ENST00000642340.2HULC-2051128No protein-
 
lncRNA
--
ENST00000646377.2HULC-2871122No protein-
 
lncRNA
--
ENST00000701376.2HULC-3211114No protein-
 
lncRNA
--
ENST00000748957.1HULC-3401113No protein-
 
lncRNA
--
ENST00000702144.1HULC-3241107No protein-
 
lncRNA
--
ENST00000642665.1HULC-2111103No protein-
 
lncRNA
--
ENST00000748951.1HULC-3341097No protein-
 
lncRNA
-GENCODE Basic
ENST00000748955.1HULC-3381087No protein-
 
lncRNA
--
ENST00000748993.1HULC-3761081No protein-
 
lncRNA
--
ENST00000642877.1HULC-2161077No protein-
 
lncRNA
--
ENST00000645863.2HULC-2761071No protein-
 
lncRNA
--
ENST00000748948.1HULC-3311056No protein-
 
lncRNA
--
ENST00000642168.1HULC-2041055No protein-
 
lncRNA
--
ENST00000749001.1HULC-3841052No protein-
 
lncRNA
--
ENST00000748964.1HULC-3471012No protein-
 
lncRNA
--
ENST00000748949.1HULC-3321001No protein-
 
lncRNA
--
ENST00000790772.1HULC-400995No protein-
 
lncRNA
--
ENST00000790760.1HULC-389982No protein-
 
lncRNA
--
ENST00000643201.1HULC-223979No protein-
 
lncRNA
--
ENST00000790771.1HULC-399976No protein-
 
lncRNA
--
ENST00000748953.1HULC-336971No protein-
 
lncRNA
-GENCODE Basic
ENST00000643889.2HULC-238962No protein-
 
lncRNA
--
ENST00000646043.1HULC-282958No protein-
 
lncRNA
--
ENST00000693633.1HULC-316958No protein-
 
lncRNA
--
ENST00000790783.1HULC-411950No protein-
 
lncRNA
-GENCODE Basic
ENST00000646981.1HULC-304948No protein-
 
lncRNA
--
ENST00000702332.1HULC-327936No protein-
 
lncRNA
--
ENST00000790786.1HULC-414918No protein-
 
lncRNA
--
ENST00000790788.1HULC-416912No protein-
 
lncRNA
--
ENST00000701356.1HULC-320906No protein-
 
lncRNA
--
ENST00000790785.1HULC-413903No protein-
 
lncRNA
--
ENST00000644605.1HULC-250896No protein-
 
lncRNA
-GENCODE Basic
ENST00000643832.1HULC-237890No protein-
 
lncRNA
-GENCODE Basic
ENST00000748946.1HULC-329887No protein-
 
lncRNA
--
ENST00000701300.1HULC-319881No protein-
 
lncRNA
--
ENST00000748963.1HULC-346876No protein-
 
lncRNA
--
ENST00000748950.1HULC-333871No protein-
 
lncRNA
--
ENST00000748978.1HULC-361867No protein-
 
lncRNA
--
ENST00000790774.1HULC-402858No protein-
 
lncRNA
--
ENST00000748954.1HULC-337854No protein-
 
lncRNA
--
ENST00000748980.1HULC-363840No protein-
 
lncRNA
-GENCODE Basic
ENST00000748966.1HULC-349807No protein-
 
lncRNA
--
ENST00000749002.1HULC-385802No protein-
 
lncRNA
--
ENST00000646774.1HULC-299782No protein-
 
lncRNA
--
ENST00000790769.1HULC-397781No protein-
 
lncRNA
--
ENST00000790778.1HULC-406781No protein-
 
lncRNA
--
ENST00000748997.1HULC-380776No protein-
 
lncRNA
-GENCODE Basic
ENST00000748979.1HULC-362742No protein-
 
lncRNA
--
ENST00000646758.1HULC-298734No protein-
 
lncRNA
-GENCODE Basic
ENST00000749004.1HULC-387720No protein-
 
lncRNA
--
ENST00000748956.1HULC-339718No protein-
 
lncRNA
--
ENST00000748969.1HULC-352694No protein-
 
lncRNA
--
ENST00000748982.1HULC-365690No protein-
 
lncRNA
--
ENST00000748983.1HULC-366688No protein-
 
lncRNA
--
ENST00000748987.1HULC-370680No protein-
 
lncRNA
-GENCODE Basic
ENST00000748990.1HULC-373664No protein-
 
lncRNA
--
ENST00000665625.1HULC-315664No protein-
 
lncRNA
--
ENST00000748968.1HULC-351656No protein-
 
lncRNA
--
ENST00000748988.1HULC-371654No protein-
 
lncRNA
--
ENST00000748986.1HULC-369646No protein-
 
lncRNA
--
ENST00000748967.1HULC-350640No protein-
 
lncRNA
--
ENST00000748981.1HULC-364639No protein-
 
lncRNA
--
ENST00000790770.1HULC-398614No protein-
 
lncRNA
--
ENST00000429060.2HULC-201612No protein-
 
lncRNA
-TSL:2
ENST00000790781.1HULC-409608No protein-
 
lncRNA
--
ENST00000790780.1HULC-408607No protein-
 
lncRNA
--
ENST00000790779.1HULC-407605No protein-
 
lncRNA
--
ENST00000646784.1HULC-300581No protein-
 
lncRNA
-GENCODE Basic
ENST00000790784.1HULC-412576No protein-
 
lncRNA
--
ENST00000748991.1HULC-374567No protein-
 
lncRNA
--
ENST00000748989.1HULC-372562No protein-
 
lncRNA
--
ENST00000646294.1HULC-285561No protein-
 
lncRNA
--
ENST00000748984.1HULC-367554No protein-
 
lncRNA
--
ENST00000790782.1HULC-410535No protein-
 
lncRNA
--
ENST00000748952.1HULC-335521No protein-
 
lncRNA
--
ENST00000749003.1HULC-386517No protein-
 
lncRNA
--
ENST00000748985.1HULC-368511No protein-
 
lncRNA
--
ENST00000748996.1HULC-379388No protein-
 
lncRNA
--
ENST00000790787.1HULC-415311No protein-
 
lncRNA
--
Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,556 bps,

Version

ENST00000647466.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.