Transcript: ENST00000646033.1 LONRF1-216

Description

LON peptidase N-terminal domain and ring finger 1 [Source:HGNC Symbol;Acc:HGNC:26302]

Gene Synonyms

FLJ23749, RNF191

Location

Scaffold HG76_PATCH: 5,918,328-5,932,445 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features and maps to 212 oligo probes.

Gene

This transcript is a product of gene ENSG00000285360.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000647269.2	LONRF1-218	3618	773aa	ENSP00000495374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAG2TK99	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000642519.1	LONRF1-210	3043	416aa	ENSP00000493550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAG2TH20	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000646033.1	LONRF1-216	1246	376aa	ENSP00000493520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAG2TH09	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000646126.1	LONRF1-217	841	199aa	ENSP00000494908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PQH4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000643654.1	LONRF1-213	2841	59aa	ENSP00000494010.1	Nonsense mediated decay	E9PRX6	-	-
ENST00000645502.1	LONRF1-215	679	59aa	ENSP00000496467.1	Nonsense mediated decay	E9PRX6	-	-
ENST00000643566.1	LONRF1-212	508	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000643781.1	LONRF1-214	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000643423.1	LONRF1-211	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,246 bps, Translation length: 376 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000646033.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000646033.1 LONRF1-216

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Transcript: ENST00000646033.1 LONRF1-216

Summary

About Us

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