Transcript: ENST00000643849.2 C8orf74-211

Description

chromosome 8 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:32296]

Location

Scaffold HG76_PATCH: 2,646,603-2,674,481 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 17164 variant alleles and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSG00000285147.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000643849.2	C8orf74-211	1042	294aa	ENSP00000495308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAG2TK55	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000645649.1	C8orf74-213	2338	99aa	ENSP00000496493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAG2TML0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000647528.1	C8orf74-214	1919	99aa	ENSP00000495817.1	Nonsense mediated decay	A0AAG2TI40	-	-
ENST00000643228.1	C8orf74-210	1201	99aa	ENSP00000494386.1	Nonsense mediated decay	A0AAG2TI40	-	-
ENST00000642701.1	C8orf74-208	529	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000643037.1	C8orf74-209	461	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000644581.1	C8orf74-212	455	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,042 bps, Translation length: 294 residues

Version

ENST00000643849.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000643849.2 C8orf74-211

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Transcript: ENST00000643849.2 C8orf74-211

Summary

About Us

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