Transcript: ENST00000643277.2 NOBOX-205

Description

NOBOX oogenesis homeobox [Source:HGNC Symbol;Acc:HGNC:22448]

Gene Synonyms

OG2, OG2X

Location

Scaffold HSCHR7_3_CTG4_4: 446,710-459,685 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 6088 variant alleles and maps to 350 oligo probes.

Gene

This transcript is a product of gene ENSG00000285328.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000643277.2	NOBOX-205	2073	691aa	ENSP00000494653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8YEW3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000644387.2	NOBOX-207	2073	691aa	ENSP00000493478.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8YEW3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000643555.2	NOBOX-206	1722	574aa	ENSP00000493764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Y4G1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000646309.2	NOBOX-208	1722	574aa	ENSP00000496425.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Y4G1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,073 bps, Translation length: 691 residues

Version

ENST00000643277.2

Type

Protein coding

Annotation Method

Annotation produced by aligning human cDNA sequences to the genome using Exonerate's cdna2genome model, which utilises annotation identifying the coding regions of the cDNA sequences, along with protein evidence from UniProtKB, from various species, aligned to the genome using GeneWise. This annotation is used where there is no manual annotation and annotation could not be projected from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000643277.2 NOBOX-205

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Transcript: ENST00000643277.2 NOBOX-205

Summary

About Us

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