Transcript: ENST00000642020.1 OR52K1-202

Description

olfactory receptor family 52 subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:15222]

Location

Chromosome 11: 4,482,646-4,493,497 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 26 domains and features, is associated with 5721 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSG00000196778.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000641528.1	OR52K1-201	5456	314aa	ENSP00000493011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31352	A0A126GVF2 Q8NGK4	NM_001005171.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000642020.1	OR52K1-202	5076	301aa	ENSP00000494197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS91422	A0A2R8Y546	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 5,076 bps, Translation length: 301 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS91422

Version

ENST00000642020.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000642020.1 OR52K1-202

Summary

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Transcript: ENST00000642020.1 OR52K1-202

Summary

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