Transcript: ENST00000641261.2 LINC02228-202

Description

long intergenic non-protein coding RNA 2228 [Source:HGNC Symbol;Acc:HGNC:53097]

Gene Synonyms

HIKER

Location

Chromosome 5: 25,101,018-25,190,956 reverse strand.

About this transcript

This transcript has 5 exons and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSG00000251273.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000726616.1	LINC02228-206	580	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000641261.2	LINC02228-202	2788	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000641970.2	LINC02228-203	1391	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000726618.1	LINC02228-208	1257	No protein	-	lncRNA	-	-
ENST00000670589.2	LINC02228-205	1165	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000507600.3	LINC02228-201	1143	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000726619.1	LINC02228-209	1054	No protein	-	lncRNA	-	-
ENST00000662466.2	LINC02228-204	816	No protein	-	lncRNA	-	-
ENST00000726620.1	LINC02228-210	594	No protein	-	lncRNA	-	-
ENST00000726621.1	LINC02228-211	553	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000726622.1	LINC02228-212	507	No protein	-	lncRNA	-	-
ENST00000726617.1	LINC02228-207	481	No protein	-	lncRNA	-	-
ENST00000726623.1	LINC02228-213	342	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,788 bps,

Version

ENST00000641261.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000641261.2 LINC02228-202

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Transcript: ENST00000641261.2 LINC02228-202

Summary

About Us

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