Transcript: ENST00000641078.2 LINC02780-201

Description

long intergenic non-protein coding RNA 2780 [Source:HGNC Symbol;Acc:HGNC:54300]

Location

Chromosome 1: 3,976,139-3,998,855 forward strand.

About this transcript

This transcript has 4 exons and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSG00000284668.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000742912.1	LINC02780-204	548	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000641078.2	LINC02780-201	1259	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000742918.1	LINC02780-210	1144	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000742919.1	LINC02780-211	1130	No protein	-	lncRNA	-	-
ENST00000742917.1	LINC02780-209	1027	No protein	-	lncRNA	-	-
ENST00000742920.1	LINC02780-212	985	No protein	-	lncRNA	-	-
ENST00000642026.2	LINC02780-203	758	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000641562.1	LINC02780-202	540	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000742914.1	LINC02780-206	500	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000742913.1	LINC02780-205	498	No protein	-	lncRNA	-	-
ENST00000742915.1	LINC02780-207	343	No protein	-	lncRNA	-	-
ENST00000742916.1	LINC02780-208	343	No protein	-	lncRNA	-	-
ENST00000742921.1	LINC02780-213	120	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,259 bps,

Version

ENST00000641078.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000641078.2 LINC02780-201

Summary

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Transcript: ENST00000641078.2 LINC02780-201

Summary

About Us

Get help

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