Transcript: ENST00000641044.2 OR2A1-201

Description

olfactory receptor family 2 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:8229]

Location

About this transcript

This transcript has 2 exons, is annotated with 24 domains and features, is associated with 4341 variant alleles and maps to 278 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000641044.2	OR2A1-201	4746	310aa	ENSP00000493454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43673	Q8NGT9	NM_001005287.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,746 bps, Translation length: 310 residues

MANE

This MANE Select transcript contains ENSP00000493454 and matches to NM_001005287.2 and NP_001005287.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NGT9

CCDS

This transcript is a member of the Human CCDS set: CCDS43673

Version

ENST00000641044.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.