Transcript: ENST00000640912.1 MRNIP-248

Description

MRN complex interacting protein [Source:HGNC Symbol;Acc:HGNC:30817]

Gene Synonyms

C5ORF45, DKFZP686L2452, LOC51149, MGC65027, MGC78537

Location

Scaffold HG30_PATCH: 605,800-624,406 reverse strand.

About this transcript

This transcript has 4 exons and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSG00000283918.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000639632.2	MRNIP-235	1168	343aa	ENSP00000491991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NTE8-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000640320.1	MRNIP-241	4145	192aa	ENSP00000491335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E5RI52	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000640690.1	MRNIP-245	1244	229aa	ENSP00000491788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z1T6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000639933.1	MRNIP-239	1096	209aa	ENSP00000492647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E5RJC6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000640658.1	MRNIP-244	1004	288aa	ENSP00000491128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NTE8-3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000638829.1	MRNIP-229	902	174aa	ENSP00000492109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EMV9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000638399.1	MRNIP-227	810	158aa	ENSP00000491513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAG2TD91	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000638261.1	MRNIP-226	410	113aa	ENSP00000491025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E5RHV0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000639837.1	MRNIP-237	2879	85aa	ENSP00000491460.1	Nonsense mediated decay	F6UWW1	-	-
ENST00000640189.1	MRNIP-240	868	82aa	ENSP00000491262.1	Nonsense mediated decay	E5RHY8	-	-
ENST00000639865.1	MRNIP-238	662	82aa	ENSP00000491874.1	Nonsense mediated decay	E5RHY8	-	-
ENST00000639381.1	MRNIP-233	579	94aa	ENSP00000491087.1	Nonsense mediated decay	E5RGF8	-	-
ENST00000640942.1	MRNIP-249	559	51aa	ENSP00000492849.1	Nonsense mediated decay	F6XPR0	-	-
ENST00000640706.1	MRNIP-246	556	90aa	ENSP00000491812.1	Nonsense mediated decay	E5RIC8	-	-
ENST00000639532.1	MRNIP-234	541	93aa	ENSP00000492243.1	Nonsense mediated decay	E5RK98	-	-
ENST00000639215.1	MRNIP-232	535	85aa	ENSP00000491576.1	Nonsense mediated decay	F6UWW1	-	-
ENST00000638405.1	MRNIP-228	503	63aa	ENSP00000492412.1	Nonsense mediated decay	E5RIJ7	-	-
ENST00000639686.1	MRNIP-236	741	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000638169.1	MRNIP-225	548	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000640912.1	MRNIP-248	1054	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000640767.1	MRNIP-247	848	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000639025.1	MRNIP-230	778	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000640348.1	MRNIP-242	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000640611.1	MRNIP-243	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000639158.1	MRNIP-231	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,054 bps,

Version

ENST00000640912.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000640912.1 MRNIP-248

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000640912.1 MRNIP-248

Summary

About Us

Get help

Our sister sites

Follow us