Human (GRCh38.p14)
Description

serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]

Gene Synonyms

CSHMT, MGC15229, MGC24556, SHMT

About this transcript

This transcript has 12 exons, is annotated with 29 domains and features, is associated with 17232 variant alleles and maps to 624 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000640392.2SHMT1-2672519483aaENSP00000492715.2
 
Protein coding
P34896-1 -Ensembl CanonicalGENCODE PrimaryGENCODE Basic
ENST00000711529.1SHMT1-2692469483aaENSP00000518786.1
 
Protein coding
P34896-1 --
ENST00000711531.1SHMT1-2711656444aaENSP00000518788.1
 
Protein coding
P34896-2 -GENCODE Basic
ENST00000711534.1SHMT1-274880167aaENSP00000518789.1
 
Protein coding
J3KRZ5 -CDS 3' incomplete
ENST00000711530.1SHMT1-2701759128aaENSP00000518787.1
 
Nonsense mediated decay
J3KRK5 --
ENST00000711532.1SHMT1-2722756No protein-
 
Retained intron
---
ENST00000711528.1SHMT1-2682652No protein-
 
Retained intron
---
ENST00000711533.1SHMT1-2731077No protein-
 
Retained intron
---
ENST00000711535.1SHMT1-275570No protein-
 
Retained intron
---
Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,519 bps, Translation length: 483 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P34896

Version

ENST00000640392.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.