Transcript: ENST00000638932.1 LIAT1-206

Description

ligand of ATE1 [Source:HGNC Symbol;Acc:HGNC:33800]

Gene Synonyms

C17ORF97, LOC400566

Location

Scaffold HG2285_HG106_HG2252_PATCH: 11,556-28,425 forward strand.

About this transcript

This transcript has 5 exons and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSG00000283985.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000639297.2	LIAT1-208	1841	423aa	ENSP00000491943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6ZQX7-4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000639580.1	LIAT1-209	878	209aa	ENSP00000492192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H7C5B9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000638954.1	LIAT1-207	736	153aa	ENSP00000491486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L0T0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000639887.1	LIAT1-210	499	6aa	ENSP00000491159.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000638932.1	LIAT1-206	758	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 758 bps,

Version

ENST00000638932.1

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000638932.1 LIAT1-206

Summary

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Transcript: ENST00000638932.1 LIAT1-206

Summary

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