Transcript: ENST00000636649.1 LINC01837-207

Description

long intergenic non-protein coding RNA 1837 [Source:HGNC Symbol;Acc:HGNC:52653]

Location

Chromosome 19: 31,937,151-32,072,080 reverse strand.

About this transcript

This transcript has 8 exons and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSG00000267489.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000651987.1	LINC01837-209	724	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000651930.1	LINC01837-208	3030	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791278.1	LINC01837-254	2058	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653197.1	LINC01837-211	1806	No protein	-	lncRNA	-	-
ENST00000593082.3	LINC01837-204	1775	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000656165.1	LINC01837-217	1681	No protein	-	lncRNA	-	-
ENST00000657612.1	LINC01837-221	1621	No protein	-	lncRNA	-	-
ENST00000791257.1	LINC01837-233	1612	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791266.1	LINC01837-242	1608	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663079.1	LINC01837-225	1578	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000635947.1	LINC01837-206	1557	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000791255.1	LINC01837-231	1485	No protein	-	lncRNA	-	-
ENST00000656360.2	LINC01837-218	1453	No protein	-	lncRNA	-	-
ENST00000656066.1	LINC01837-216	1402	No protein	-	lncRNA	-	-
ENST00000592270.2	LINC01837-203	1349	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000590021.2	LINC01837-201	1320	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000659249.1	LINC01837-223	1296	No protein	-	lncRNA	-	-
ENST00000666081.2	LINC01837-227	1284	No protein	-	lncRNA	-	-
ENST00000663136.1	LINC01837-226	1164	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658221.1	LINC01837-222	1065	No protein	-	lncRNA	-	-
ENST00000636649.1	LINC01837-207	1056	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000791296.1	LINC01837-272	1054	No protein	-	lncRNA	-	-
ENST00000791284.1	LINC01837-260	1030	No protein	-	lncRNA	-	-
ENST00000654437.2	LINC01837-214	1015	No protein	-	lncRNA	-	-
ENST00000666639.1	LINC01837-228	1001	No protein	-	lncRNA	-	-
ENST00000652929.1	LINC01837-210	987	No protein	-	lncRNA	-	-
ENST00000657538.2	LINC01837-220	964	No protein	-	lncRNA	-	-
ENST00000791271.1	LINC01837-247	962	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791286.1	LINC01837-262	936	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654669.1	LINC01837-215	892	No protein	-	lncRNA	-	-
ENST00000791258.1	LINC01837-234	889	No protein	-	lncRNA	-	-
ENST00000791272.1	LINC01837-248	878	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791268.1	LINC01837-244	864	No protein	-	lncRNA	-	-
ENST00000791267.1	LINC01837-243	856	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670492.1	LINC01837-230	851	No protein	-	lncRNA	-	-
ENST00000669478.2	LINC01837-229	818	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791285.1	LINC01837-261	785	No protein	-	lncRNA	-	-
ENST00000660926.2	LINC01837-224	778	No protein	-	lncRNA	-	-
ENST00000791299.1	LINC01837-275	767	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791276.1	LINC01837-252	766	No protein	-	lncRNA	-	-
ENST00000791283.1	LINC01837-259	764	No protein	-	lncRNA	-	-
ENST00000791273.1	LINC01837-249	754	No protein	-	lncRNA	-	-
ENST00000791292.1	LINC01837-268	751	No protein	-	lncRNA	-	-
ENST00000791288.1	LINC01837-264	743	No protein	-	lncRNA	-	-
ENST00000791287.1	LINC01837-263	719	No protein	-	lncRNA	-	-
ENST00000791263.1	LINC01837-239	703	No protein	-	lncRNA	-	-
ENST00000791301.1	LINC01837-277	698	No protein	-	lncRNA	-	-
ENST00000654314.1	LINC01837-213	681	No protein	-	lncRNA	-	-
ENST00000791274.1	LINC01837-250	671	No protein	-	lncRNA	-	-
ENST00000791290.1	LINC01837-266	658	No protein	-	lncRNA	-	-
ENST00000590053.1	LINC01837-202	647	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000791277.1	LINC01837-253	640	No protein	-	lncRNA	-	-
ENST00000791293.1	LINC01837-269	616	No protein	-	lncRNA	-	-
ENST00000653579.2	LINC01837-212	612	No protein	-	lncRNA	-	-
ENST00000791275.1	LINC01837-251	612	No protein	-	lncRNA	-	-
ENST00000791291.1	LINC01837-267	610	No protein	-	lncRNA	-	-
ENST00000593211.1	LINC01837-205	570	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000791298.1	LINC01837-274	566	No protein	-	lncRNA	-	-
ENST00000791261.1	LINC01837-237	562	No protein	-	lncRNA	-	-
ENST00000791280.1	LINC01837-256	561	No protein	-	lncRNA	-	-
ENST00000791269.1	LINC01837-245	554	No protein	-	lncRNA	-	-
ENST00000791295.1	LINC01837-271	545	No protein	-	lncRNA	-	-
ENST00000791297.1	LINC01837-273	543	No protein	-	lncRNA	-	-
ENST00000791259.1	LINC01837-235	542	No protein	-	lncRNA	-	-
ENST00000791265.1	LINC01837-241	538	No protein	-	lncRNA	-	-
ENST00000791279.1	LINC01837-255	534	No protein	-	lncRNA	-	-
ENST00000791303.1	LINC01837-279	529	No protein	-	lncRNA	-	-
ENST00000791300.1	LINC01837-276	506	No protein	-	lncRNA	-	-
ENST00000657281.1	LINC01837-219	504	No protein	-	lncRNA	-	-
ENST00000791262.1	LINC01837-238	496	No protein	-	lncRNA	-	-
ENST00000791282.1	LINC01837-258	492	No protein	-	lncRNA	-	-
ENST00000791260.1	LINC01837-236	478	No protein	-	lncRNA	-	-
ENST00000791304.1	LINC01837-280	475	No protein	-	lncRNA	-	-
ENST00000791264.1	LINC01837-240	470	No protein	-	lncRNA	-	-
ENST00000791294.1	LINC01837-270	458	No protein	-	lncRNA	-	-
ENST00000791256.1	LINC01837-232	455	No protein	-	lncRNA	-	-
ENST00000791305.1	LINC01837-281	453	No protein	-	lncRNA	-	-
ENST00000791289.1	LINC01837-265	398	No protein	-	lncRNA	-	-
ENST00000791281.1	LINC01837-257	392	No protein	-	lncRNA	-	-
ENST00000791306.1	LINC01837-282	379	No protein	-	lncRNA	-	-
ENST00000791302.1	LINC01837-278	331	No protein	-	lncRNA	-	-
ENST00000791270.1	LINC01837-246	304	No protein	-	lncRNA	-	-
ENST00000791307.1	LINC01837-283	302	No protein	-	lncRNA	-	-
ENST00000791308.1	LINC01837-284	262	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,056 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000636649.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000636649.1 LINC01837-207

Summary

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Transcript: ENST00000636649.1 LINC01837-207

Summary

About Us

Get help

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