Transcript: ENST00000635200.1

Description

novel protein

Location

Chromosome 6: 26,196,754-26,199,293 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 2427 variant alleles and maps to 374 oligo probes.

Gene

This transcript is a product of gene ENSG00000282988.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000635200.1	-	948	169aa	ENSP00000489311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RR32	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000650491.1	-	1575	140aa	ENSP00000497054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3IS11	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000635641.1	-	1637	170aa	ENSP00000489536.1	Nonsense mediated decay	A0A0U1RRH7	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 948 bps, Translation length: 169 residues

Transcript Support Level (TSL)

TSL:3

Version

ENST00000635200.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000635200.1

Summary

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Transcript: ENST00000635200.1

Summary

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