Transcript: ENST00000631822.1 C17orf78-202

Description

chromosome 17 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:26831]

Gene Synonyms

FLJ39647

Location

Scaffold HSCHR17_7_CTG4: 1,611,993-1,628,725 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSG00000278145.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000616425.2	C17orf78-201	1862	275aa	ENSP00000484072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4C9-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000631822.1	C17orf78-202	1675	159aa	ENSP00000488505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4C9-2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,675 bps, Translation length: 159 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N4C9

Transcript Support Level (TSL)

TSL:2

Version

ENST00000631822.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non canonical conserved [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000631822.1 C17orf78-202

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Transcript: ENST00000631822.1 C17orf78-202

Summary

About Us

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