Transcript: ENST00000630528.2 ZNF780A-235

Description

zinc finger protein 780A [Source:HGNC Symbol;Acc:HGNC:27603]

Gene Synonyms

ZNF780

Location

Scaffold HG2021_PATCH: 348,136-366,081 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 100 domains and features, is associated with 6877 variant alleles and maps to 472 oligo probes.

Gene

This transcript is a product of gene ENSG00000280568.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000630528.2	ZNF780A-235	3600	642aa	ENSP00000486345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O75290-3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000629480.2	ZNF780A-233	7500	607aa	ENSP00000486823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DG08	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000628273.2	ZNF780A-231	3674	641aa	ENSP00000487520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O75290-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000626829.2	ZNF780A-229	3472	641aa	ENSP00000487177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O75290-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000630440.2	ZNF780A-234	2396	158aa	ENSP00000486672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O75290-2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000626168.2	ZNF780A-227	2044	642aa	ENSP00000487366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O75290-3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000625733.2	ZNF780A-226	546	156aa	ENSP00000487510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0QXV4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000627069.1	ZNF780A-230	498	90aa	ENSP00000485974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0QYL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000628727.2	ZNF780A-232	665	109aa	ENSP00000486312.1	Non stop decay	A0A075B791	-	-
ENST00000626417.2	ZNF780A-228	467	106aa	ENSP00000486727.1	Non stop decay	A0A075B7B0	-	-
ENST00000630978.2	ZNF780A-236	446	110aa	ENSP00000486848.1	Non stop decay	A0A075B796	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 3,600 bps, Translation length: 642 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75290

Version

ENST00000630528.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000630528.2 ZNF780A-235

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Transcript: ENST00000630528.2 ZNF780A-235

Summary

About Us

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