Transcript: ENST00000628744.3 TGM4-212

Description

transglutaminase 4 [Source:HGNC Symbol;Acc:HGNC:11780]

Gene Synonyms

TGP

Location

Scaffold HG2066_PATCH: 399,958-440,340 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 16 domains and features, is associated with 16999 variant alleles and maps to 599 oligo probes.

Gene

This transcript is a product of gene ENSG00000281886.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000628744.3	TGM4-212	3391	684aa	ENSP00000487307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P49221	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000627547.2	TGM4-211	641	91aa	ENSP00000487489.1	Nonsense mediated decay	F8WCU8	-	-
ENST00000626379.1	TGM4-210	137	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000626185.1	TGM4-209	1746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000629749.1	TGM4-213	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000625785.1	TGM4-208	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,391 bps, Translation length: 684 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49221

Version

ENST00000628744.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000628744.3 TGM4-212

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Transcript: ENST00000628744.3 TGM4-212

Summary

About Us

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